CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67724	Canola	nucleus	97.94	97.94
CDX87631	Canola	nucleus	85.57	85.13
CDX73240	Canola	cytosol	84.02	81.91
AT1G76180.1	Thale cress	nucleus	76.8	80.54
CDX68109	Canola	nucleus	79.38	79.38
CDY01372	Canola	cytosol	60.82	53.64
CDY31888	Canola	cytosol	59.28	53.24
VIT_18s0001g00360.t01	Wine grape	cytosol	56.19	52.91
KRH60791	Soybean	endoplasmic reticulum	53.61	48.6
Solyc04g082200.2.1	Tomato	nucleus	47.42	44.66
CDY31469	Canola	cytosol	61.34	43.91
PGSC0003DMT400025812	Potato	cytosol	46.91	43.54

Protein Annotations

EnsemblPlants:CDY68984	EnsemblPlantsGene:GSBRNA2T00081968001	GO:A0A078JQB1	GO:GO:0006950	GO:GO:0008150	GO:GO:0009415
GO:GO:0009628	InterPro:Dehydrin	InterPro:Dehydrin_CS	PANTHER:PTHR33346	PANTHER:PTHR33346:SF2	PFAM:PF00257
ProteinID:CDY68984	ProteinID:CDY68984.1	ScanProsite:PS00823	SEG:seg	UniParc:UPI0004EE2C6E	UniProt:A0A078JQB1
MapMan:35.2	:	:	:	:	:

Description

BnaAnng29030DBnaAnng29030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQB1]

Coordinates

chrLK038408:+:1868..2886

Molecular Weight (calculated)

21874.6 Da

IEP (calculated)

5.677

GRAVY (calculated)

-1.321

Length

194 amino acids

Sequence
(BLAST)

001: MAEETKSVVH EQEVPKVTTE ESSAEVTDRG LFDFLGKKKE ETKPEETIDS EFEHKVHISE PVVPEVKHEK EEKKHSLLEK LHRSDSSFSS SSEEEGEDGE
101: KRKKKKDKKK TATTAEGEVK TEEEKKGFMD KLKEKLPGHG KKPEDASPAA PVVAPPVEEA HPAEKKGILE KIKEKLPGYH PKTVDEVKKE KETD

Best Arabidopsis Sequence Match ( AT1G76180.1 )
(BLAST)

001: MAEEIKNVPE QEVPKVATEE SSAEVTDRGL FDFLGKKKDE TKPEETPIAS EFEQKVHISE PEPEVKHESL LEKLHRSDSS SSSSSEEEGS DGEKRKKKKE
101: KKKPTTEVEV KEEEKKGFME KLKEKLPGHK KPEDGSAVAA APVVVPPPVE EAHPVEKKGI LEKIKEKLPG YHPKTTVEEE KKDKE

Arabidopsis Description

ERD14Dehydrin ERD14 [Source:UniProtKB/Swiss-Prot;Acc:P42763]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.