CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015779.1-P	Field mustard	cytosol	97.44	97.44
CDX73240	Canola	cytosol	96.41	94.47
CDY67724	Canola	nucleus	86.15	86.6
CDY68984	Canola	nucleus	85.13	85.57
CDX68109	Canola	nucleus	83.08	83.51
AT1G76180.1	Thale cress	nucleus	74.36	78.38
CDY01372	Canola	cytosol	61.54	54.55
CDY31888	Canola	cytosol	60.0	54.17
VIT_18s0001g00360.t01	Wine grape	cytosol	56.92	53.88
KRH60791	Soybean	endoplasmic reticulum	55.38	50.47
Solyc04g082200.2.1	Tomato	nucleus	47.18	44.66
CDY31469	Canola	cytosol	62.05	44.65
PGSC0003DMT400025812	Potato	cytosol	46.67	43.54

Protein Annotations

EnsemblPlants:CDX87631	EnsemblPlantsGene:GSBRNA2T00146637001	GO:A0A078DEG1	GO:GO:0006950	GO:GO:0008150	GO:GO:0009415
GO:GO:0009628	InterPro:Dehydrin	InterPro:Dehydrin_CS	PANTHER:PTHR33346	PANTHER:PTHR33346:SF2	ProteinID:CDX87631
ProteinID:CDX87631.1	ScanProsite:PS00315	ScanProsite:PS00823	SEG:seg	UniParc:UPI0003E6D9D6	MapMan:35.2

Description

BnaA07g32420D

Coordinates

chrLK031850:+:1529754..1530723

Molecular Weight (calculated)

22022.6 Da

IEP (calculated)

5.481

GRAVY (calculated)

-1.471

Length

195 amino acids

Sequence
(BLAST)

001: MADETKNVHE HEAPKVATEE SSTATGEVTD RGLFDFLGKK KDETKPEETI DSEFEQKVHI SEPVPEVKHE EEKEEKKHSL LEKLHRSDSS SSSSSEEEGE
101: DGVKRKKKKD KKKVTTTEGE VKTEEEKKGF MDKLKEKLPG HGKKPEEPSP APVVAPPVEE AHPAEKKGIL EKIKEKLPGY HPKTVEEEKK DKDDH

Best Arabidopsis Sequence Match ( AT1G76180.1 )
(BLAST)

001: MAEEIKNVPE QEVPKVATEE SSAEVTDRGL FDFLGKKKDE TKPEETPIAS EFEQKVHISE PEPEVKHESL LEKLHRSDSS SSSSSEEEGS DGEKRKKKKE
101: KKKPTTEVEV KEEEKKGFME KLKEKLPGHK KPEDGSAVAA APVVVPPPVE EAHPVEKKGI LEKIKEKLPG YHPKTTVEEE KKDKE

Arabidopsis Description

ERD14Dehydrin ERD14 [Source:UniProtKB/Swiss-Prot;Acc:P42763]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.