Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024475.1-P | Field mustard | cytosol | 92.19 | 92.19 |
| CDY20922 | Canola | cytosol | 91.67 | 91.67 |
| CDY29224 | Canola | cytosol | 91.67 | 91.67 |
| KRH08242 | Soybean | cytosol | 85.94 | 85.94 |
| KRH69898 | Soybean | cytosol | 84.9 | 84.9 |
| VIT_04s0023g01940.t01 | Wine grape | cytosol | 84.38 | 84.38 |
| PGSC0003DMT400040024 | Potato | cytosol | 83.33 | 83.77 |
| CDY25160 | Canola | nucleus | 62.5 | 83.33 |
| Solyc02g062680.2.1 | Tomato | cytosol | 82.81 | 83.25 |
| GSMUA_Achr1P03050_001 | Banana | cytosol | 79.69 | 78.46 |
| Zm00001d009440_P001 | Maize | cytoskeleton, cytosol, nucleus | 77.6 | 74.13 |
| Os05t0579800-01 | Rice | cytosol | 77.08 | 73.63 |
| EES19889 | Sorghum | cytoskeleton, cytosol, nucleus | 76.56 | 73.13 |
| Zm00001d038881_P001 | Maize | cytoskeleton, cytosol, nucleus | 72.92 | 70.71 |
| HORVU1Hr1G091550.1 | Barley | cytosol, nucleus | 75.0 | 63.16 |
| KRG99106 | Soybean | nucleus | 31.25 | 49.18 |
| HORVU5Hr1G110350.1 | Barley | cytosol, nucleus, plastid | 27.08 | 48.6 |
| TraesCS5A01G358300.1 | Wheat | nucleus | 28.65 | 36.42 |
| TraesCS6A01G073800.1 | Wheat | nucleus | 28.65 | 36.42 |
| TraesCS1D01G323600.1 | Wheat | nucleus | 28.12 | 35.76 |
| TraesCS7A01G155100.1 | Wheat | nucleus | 28.12 | 35.76 |
| TraesCS3B01G195200.1 | Wheat | nucleus | 27.08 | 34.44 |
| KRH49548 | Soybean | mitochondrion, plastid | 27.6 | 29.78 |
Protein Annotations
| MapMan:13.3.4.1.1.3.2 | Gene3D:2.60.120.260 | EntrezGene:816345 | UniProt:A0A178VXG8 | ProteinID:AAD15507.2 | ProteinID:AEC06751.1 |
| EMBL:AK229538 | Symbol:APC10 | InterPro:APC10/Doc1 | InterPro:APC_su10/DOC_dom | ArrayExpress:AT2G18290 | EnsemblPlantsGene:AT2G18290 |
| RefSeq:AT2G18290 | TAIR:AT2G18290 | RefSeq:AT2G18290-TAIR-G | EnsemblPlants:AT2G18290.1 | TAIR:AT2G18290.1 | EMBL:AY087130 |
| Unigene:At.63472 | EMBL:BT024912 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005680 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008283 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010087 | GO:GO:0016567 |
| GO:GO:0016604 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031145 | GO:GO:0032875 | GO:GO:0032876 |
| GO:GO:0051301 | GO:GO:0061630 | GO:GO:0070979 | GO:GO:1904668 | InterPro:Galactose-bd-like_sf | InterPro:IPR004939 |
| InterPro:IPR008979 | RefSeq:NP_565433.1 | ProteinID:OAP09532.1 | PFAM:PF03256 | PIRSF:PIRSF028841 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51284 | PANTHER:PTHR12936 | UniProt:Q9ZPW2 | SMART:SM01337 | SUPFAM:SSF49785 | UniParc:UPI00000A3ECA |
| SEG:seg | : | : | : | : | : |
Description
APC10Anaphase-promoting complex subunit 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPW2]
Coordinates
chr2:-:7948306..7950329
Molecular Weight (calculated)
21750.9 Da
IEP (calculated)
6.678
GRAVY (calculated)
-0.433
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MATESSESEE EGKISGGNYK LIIDDDLREM GKNAAWSVSS CKPGNGVTTL RDDNLETYWQ SDGLQPHLIN IQFQKKVKLQ LVVLYVDFKL DESYTPSKIS
101: IRAGDGFHNL KEIKSVELVK PTGWVCLSLS GTDPRETFVN TFMLQIAILS NHLNGRDTHI RQIKVYGPRP NPIPHQPFQF TSMEFLTYST LR
101: IRAGDGFHNL KEIKSVELVK PTGWVCLSLS GTDPRETFVN TFMLQIAILS NHLNGRDTHI RQIKVYGPRP NPIPHQPFQF TSMEFLTYST LR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.