Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30379 | Canola | cytosol | 33.33 | 83.87 |
| CDY53659 | Canola | nucleus | 81.41 | 81.41 |
| CDY55504 | Canola | nucleus | 78.85 | 78.34 |
| Bra004740.1-P | Field mustard | nucleus | 78.85 | 78.34 |
| Bra037738.1-P | Field mustard | nucleus | 74.36 | 73.42 |
| CDY56346 | Canola | nucleus | 62.18 | 72.93 |
| PGSC0003DMT400014179 | Potato | mitochondrion | 30.77 | 37.5 |
| Solyc12g042010.1.1 | Tomato | mitochondrion | 28.85 | 35.43 |
| GSMUA_Achr11P... | Banana | nucleus | 35.26 | 34.81 |
| Os04t0660100-01 | Rice | cytosol | 39.74 | 30.69 |
| TraesCS2B01G527100.1 | Wheat | nucleus, plastid | 39.1 | 30.35 |
| TraesCS2D01G499200.1 | Wheat | nucleus, plastid | 38.46 | 30.0 |
| KXG27318 | Sorghum | plastid | 39.74 | 29.95 |
| TraesCS2A01G499000.1 | Wheat | plastid | 38.46 | 29.85 |
| Zm00001d001982_P001 | Maize | nucleus | 39.74 | 29.81 |
| Zm00001d026510_P001 | Maize | nucleus | 38.46 | 28.85 |
| HORVU2Hr1G111110.2 | Barley | mitochondrion | 37.18 | 28.29 |
Protein Annotations
| MapMan:15.5.32 | EntrezGene:818908 | ProteinID:AAD22125.1 | ProteinID:AEC10204.1 | EMBL:AJ576045 | ArrayExpress:AT2G43060 |
| EnsemblPlantsGene:AT2G43060 | RefSeq:AT2G43060 | TAIR:AT2G43060 | RefSeq:AT2G43060-TAIR-G | EnsemblPlants:AT2G43060.1 | TAIR:AT2G43060.1 |
| EMBL:AY062456 | EMBL:AY093279 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009741 |
| GO:GO:0009742 | GO:GO:0009826 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 |
| GO:GO:0040008 | GO:GO:0043565 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | Symbol:IBH1 | InterPro:IPR036638 |
| RefSeq:NP_181834.1 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007095 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33124 | PANTHER:PTHR33124:SF31 | UniProt:Q9SKX1 |
| SUPFAM:SSF47459 | UniParc:UPI0000052A18 | SEG:seg | : | : | : |
Description
IBH1Transcription factor IBH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKX1]
Coordinates
chr2:+:17909007..17910210
Molecular Weight (calculated)
17825.7 Da
IEP (calculated)
11.097
GRAVY (calculated)
-0.674
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MASADKLINT DVPEKDVFAF HFLQSLSNLR KQNPFDTPDQ KNYRVRKIKK AAYVSMARAA GGSSRLWSRA LLRRADKDDN KIVRFSRRKW KISSKRRRSN
101: QRAPVVEEAA ERLRNLVPGG GGMETSKLME ETAHYIKCLS MQVKVMQCLV DGLSPK
101: QRAPVVEEAA ERLRNLVPGG GGMETSKLME ETAHYIKCLS MQVKVMQCLV DGLSPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.