Factsheet for AT3G28715.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G28710.1	Thale cress	cytosol	99.15	99.15
GSMUA_Achr1P11740_001	Banana	cytosol	82.05	94.43
KRH01133	Soybean	cytosol	94.3	94.3
KRH40128	Soybean	endoplasmic reticulum	94.3	94.3
GSMUA_Achr6P35890_001	Banana	cytosol	81.77	94.1
VIT_14s0108g00080.t01	Wine grape	cytosol, extracellular	93.45	93.45
CDY46357	Canola	cytosol	19.09	93.06
PGSC0003DMT400072522	Potato	cytosol, mitochondrion	91.74	91.74
Solyc10g081530.1.1	Tomato	nucleus, plastid	91.74	91.74
EES03178	Sorghum	cytosol	89.46	89.46
Os01t0587000-01	Rice	plasma membrane	89.46	89.46
TraesCS3A01G210400.2	Wheat	cytosol, golgi	88.6	88.6
TraesCS3B01G241000.1	Wheat	cytosol	88.32	88.32
TraesCS3D01G213200.1	Wheat	cytosol	88.32	88.32
HORVU3Hr1G050990.2	Barley	vacuole	87.75	87.75
Zm00001d011238_P001	Maize	cytosol	44.44	60.7

Protein Annotations

Gene3D:1.10.132.50	Gene3D:1.20.1690.10	MapMan:24.1.1.1.3	EntrezGene:822503	UniProt:A0A178VAM3	ProteinID:AEE77481.1
EMBL:AF428348	ArrayExpress:AT3G28715	EnsemblPlantsGene:AT3G28715	RefSeq:AT3G28715	TAIR:AT3G28715	RefSeq:AT3G28715-TAIR-G
EnsemblPlants:AT3G28715.1	TAIR:AT3G28715.1	InterPro:ATPase_V0-cplx_csu/dsu	InterPro:ATPase_V0-cplx_dsu	InterPro:ATPase_su_C-like	EMBL:AY062635
Unigene:At.23331	ProteinID:BAB03168.1	EMBL:BT000154	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005765
GO:GO:0005773	GO:GO:0005774	GO:GO:0005794	GO:GO:0006810	GO:GO:0006811	GO:GO:0007034
GO:GO:0007035	GO:GO:0008150	GO:GO:0008553	GO:GO:0009506	GO:GO:0009987	GO:GO:0015078
GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016471	GO:GO:0016787	GO:GO:0019725
GO:GO:0033179	GO:GO:0046961	InterPro:IPR035067	RefSeq:NP_189513.1	ProteinID:OAP02814.1	PFAM:PF01992
PIRSF:PIRSF018497	PO:PO:0000005	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0025195
PO:PO:0025281	PANTHER:PTHR11028	PANTHER:PTHR11028:SF0	UniProt:Q9LHA4	SUPFAM:SSF103486	UniParc:UPI0000000D3D
InterPro:V-type_ATPase_suC	:	:	:	:	:

Description

VHA-D2V-type proton ATPase subunit d2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHA4]

Coordinates

chr3:+:10777849..10780664

Molecular Weight (calculated)

40790.0 Da

IEP (calculated)

4.751

GRAVY (calculated)

-0.200

Length

351 amino acids

Sequence
(BLAST)

001: MYGFEALTFN IHGGYLEAIV RGHRAGLLTT ADYNNLCQCE NLDDIKMHLS ATKYGPYLQN EPSPLHTTTI VEKCTLKLVD DYKHMLCQAT EPMSTFLEYI
101: RYGHMIDNVV LIVTGTLHER DVQELIEKCH PLGMFDSIAT LAVAQNMREL YRLVLVDTPL APYFSECLTS EDLDDMNIEI MRNTLYKAYL EDFYNFCQKL
201: GGATAEIMSD LLAFEADRRA VNITINSIGT ELTREDRKKL YSNFGLLYPY GHEELAICED IDQVRGVMEK YPPYQAIFSK MSYGESQMLD KAFYEEEVRR
301: LCLAFEQQFH YAVFFAYMRL REQEIRNLMW ISECVAQNQK SRIHDSVVYM F

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.