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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037609.1-P Field mustard plastid 86.29 86.73
CDY20339 Canola plastid 86.29 86.73
CDY29728 Canola plastid 85.79 86.22
GSMUA_Achr9P23590_001 Banana endoplasmic reticulum 60.41 73.01
KRH25112 Soybean plastid 72.08 72.08
VIT_06s0061g00770.t01 Wine grape plastid 71.07 71.79
KRH30554 Soybean nucleus, plastid 72.08 71.72
PGSC0003DMT400001214 Potato plastid 67.01 68.75
Solyc11g066410.1.1 Tomato plastid 67.01 68.75
Os02t0822600-01 Rice plastid 59.9 63.1
TraesCS6B01G450500.1 Wheat plastid 58.88 60.73
EES07707 Sorghum plastid 58.38 59.28
TraesCS6D01G390000.1 Wheat plastid 58.88 58.88
TraesCS6A01G406500.1 Wheat plastid 58.38 57.21
HORVU6Hr1G093030.1 Barley plastid 58.88 53.95
Zm00001d018412_P001 Maize plastid 19.29 41.76
Protein Annotations
MapMan:17.7.2.1.7Gene3D:3.10.430.100Gene3D:3.40.5.10EntrezGene:823623UniProt:A0A178VBQ7ProteinID:AEE77965.1
ArrayExpress:AT3G44890EnsemblPlantsGene:AT3G44890RefSeq:AT3G44890TAIR:AT3G44890RefSeq:AT3G44890-TAIR-GEnsemblPlants:AT3G44890.1
TAIR:AT3G44890.1EMBL:BT000914ProteinID:CAA77594.1ProteinID:CAC03539.1ncoils:CoilGO:GO:0000311
GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003735GO:GO:0005198GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005840
GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0009941GO:GO:0009987GO:GO:0019538GO:GO:0019843GO:GO:0030529
InterPro:IPR036791InterPro:IPR036935HAMAP:MF_00503RefSeq:NP_190075.1ProteinID:OAP02382.1UniProt:P25864
PFAM:PF01281PFAM:PF03948PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS00651PANTHER:PTHR21368PANTHER:PTHR21368:SF18
Symbol:RPL9InterPro:Ribosomal_L9InterPro:Ribosomal_L9/RNase_H1_NInterPro:Ribosomal_L9_CInterPro:Ribosomal_L9_C_sfInterPro:Ribosomal_L9_N
InterPro:Ribosomal_L9_N_sfInterPro:Ribosomal_L9_bac/chpSUPFAM:SSF55653SUPFAM:SSF55658TIGRFAMs:TIGR00158UniParc:UPI0000001AF8
EMBL:Z11129SEG:seg::::
Description
RPL9RPL9 [Source:UniProtKB/TrEMBL;Acc:A0A178VBQ7]
Coordinates
chr3:+:16386395..16388723
Molecular Weight (calculated)
22135.1 Da
IEP (calculated)
10.437
GRAVY (calculated)
-0.322
Length
197 amino acids
Sequence
(BLAST)
001: MASSTALSLS WSSSPCWSHS FNGGANETLK VSERRFNFEV VSQKKAKKLR KVILKEDVTD LGKQGQLLDV KAGFFRNFLL PTGKAQLMTP LLLKELKMED
101: ERIEAEKQRV KEEAQQLAMV FQTVGAFKVK RKGGKGKLIF GSVTAQDLVD IIKSQLQKDI DKRLVSLPEI RETGEYIAEL KLHPDVTARV KINVFAN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.