Factsheet for HORVU6Hr1G093030.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G390000.1	Wheat	plastid	88.84	96.95
TraesCS6B01G450500.1	Wheat	plastid	86.05	96.86
TraesCS6A01G406500.1	Wheat	plastid	86.05	92.04
Os02t0822600-01	Rice	plastid	73.95	85.03
EES07707	Sorghum	plastid	75.81	84.02
Zm00001d018412_P001	Maize	plastid	32.09	75.82
GSMUA_Achr9P23590_001	Banana	endoplasmic reticulum	50.7	66.87
VIT_06s0061g00770.t01	Wine grape	plastid	55.35	61.03
Solyc11g066410.1.1	Tomato	plastid	54.42	60.94
Bra037609.1-P	Field mustard	plastid	55.35	60.71
CDY20339	Canola	plastid	55.35	60.71
CDY29728	Canola	plastid	54.88	60.2
PGSC0003DMT400001214	Potato	plastid	53.02	59.38
AT3G44890.1	Thale cress	plastid	53.95	58.88
KRH25112	Soybean	plastid	53.02	57.87
KRH30554	Soybean	nucleus, plastid	53.02	57.58

Protein Annotations

MapMan:17.7.2.1.7	Gene3D:3.10.430.100	Gene3D:3.40.5.10	UniProt:A0A287V7W1	ncoils:Coil	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G093030
EnsemblPlants:HORVU6Hr1G093030.1	InterPro:IPR036791	InterPro:IPR036935	HAMAP:MF_00503	PFAM:PF01281	PFAM:PF03948
ScanProsite:PS00651	PANTHER:PTHR21368	PANTHER:PTHR21368:SF18	InterPro:Ribosomal_L9	InterPro:Ribosomal_L9/RNase_H1_N	InterPro:Ribosomal_L9_C
InterPro:Ribosomal_L9_C_sf	InterPro:Ribosomal_L9_N	InterPro:Ribosomal_L9_N_sf	InterPro:Ribosomal_L9_bac/chp	SUPFAM:SSF55653	SUPFAM:SSF55658
TIGRFAMs:TIGR00158	UniParc:UPI000B46F091	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:578779439..578782201

Molecular Weight (calculated)

24096.3 Da

IEP (calculated)

10.617

GRAVY (calculated)

-0.493

Length

215 amino acids

Sequence
(BLAST)

001: DKRVLQPSST PEHRKHTAMA SPSCASTLPW TAASSSPSSA FSSPRRLQTR RAPSLVIVAQ GRVKKYRQVI LMDDIDEISG KKGDTMKVRA GFYRNFLLPK
101: GKATLLTPDV LKEMQLEQER IEAEKKRVKE EAQQLARVFE TIGAFKVPRK GGKGKQIFGS VTAQDLIDII KSQLNRDVDK RLVEVPEIRE VGEYVAEIKL
201: HPDVTAKVRL TVYAK

Best Arabidopsis Sequence Match ( AT3G44890.1 )
(BLAST)

001: MASSTALSLS WSSSPCWSHS FNGGANETLK VSERRFNFEV VSQKKAKKLR KVILKEDVTD LGKQGQLLDV KAGFFRNFLL PTGKAQLMTP LLLKELKMED
101: ERIEAEKQRV KEEAQQLAMV FQTVGAFKVK RKGGKGKLIF GSVTAQDLVD IIKSQLQKDI DKRLVSLPEI RETGEYIAEL KLHPDVTARV KINVFAN

Arabidopsis Description

RPL9RPL9 [Source:UniProtKB/TrEMBL;Acc:A0A178VBQ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.