Factsheet for AT4G24210.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013776.1-P	Field mustard	nucleus	68.87	71.23
CDY03475	Canola	nucleus	68.87	71.23
CDY34266	Canola	nucleus	68.87	71.23
KRH15421	Soybean	cytosol	51.66	54.17
VIT_18s0001g09700.t01	Wine grape	nucleus	62.25	51.09
KRH52046	Soybean	cytosol	58.28	50.57
KRH61359	Soybean	cytosol	59.6	49.18
KRH05620	Soybean	cytosol	53.64	46.55
GSMUA_Achr9P22610_001	Banana	cytosol, nucleus, plastid	43.71	40.49
PGSC0003DMT400008560	Potato	nucleus	52.98	38.65
Solyc04g078390.1.1	Tomato	cytosol, mitochondrion, nucleus	54.3	37.96
TraesCS3A01G055700.1	Wheat	nucleus	33.77	23.5
TraesCS3B01G068100.1	Wheat	nucleus	33.77	23.29
Zm00001d016973_P001	Maize	nucleus	35.76	22.88
AT5G48170.1	Thale cress	cytosol	23.18	22.29
OQU85206	Sorghum	nucleus, plastid	34.44	19.48
Zm00001d050903_P001	Maize	cytosol	35.76	14.14

Protein Annotations

Gene3D:1.20.1280.50	MapMan:11.6.2.3	MapMan:19.2.2.8.1.4.1	MapMan:19.2.2.8.1.4.6	EntrezGene:828522	UniProt:A0A178V5B2
ProteinID:AEE84867.1	ArrayExpress:AT4G24210	EnsemblPlantsGene:AT4G24210	RefSeq:AT4G24210	TAIR:AT4G24210	RefSeq:AT4G24210-TAIR-G
EnsemblPlants:AT4G24210.1	TAIR:AT4G24210.1	EMBL:AY087672	EMBL:BT004192	EMBL:BT005395	ProteinID:CAB45056.1
ProteinID:CAB79331.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009740	GO:GO:0009791	GO:GO:0009845	GO:GO:0009987	GO:GO:0010162	GO:GO:0016567
GO:GO:0019005	GO:GO:0019538	InterPro:IPR001810	RefSeq:NP_194152.1	ProteinID:OAP00858.1	PFAM:PF00646
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PANTHER:PTHR12874	PANTHER:PTHR12874:SF10	UniProt:Q9STX3	Symbol:SLY1	SUPFAM:SSF81383	UniParc:UPI000000C2D3

Description

GID2SLY1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5B2]

Coordinates

chr4:+:12563279..12564482

Molecular Weight (calculated)

17456.0 Da

IEP (calculated)

9.475

GRAVY (calculated)

-0.611

Length

151 amino acids

Sequence
(BLAST)

001: MKRSTTDSDL AGDAHNETNK KMKSTEEEEI GFSNLDENLV YEVLKHVDAK TLAMSSCVSK IWHKTAQDER LWELICTRHW TNIGCGQNQL RSVVLALGGF
101: RRLHSLYLWP LSKPNPRARF GKDELKLTLS LLSIRYYEKM SFTKRPLPES K

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.