Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023956.1-P | Field mustard | cytosol | 73.95 | 67.69 |
| CDY13480 | Canola | cytosol | 73.95 | 67.69 |
| CDX72353 | Canola | cytosol | 68.07 | 66.94 |
| CDX75234 | Canola | cytosol | 71.43 | 66.67 |
| CDX68833 | Canola | nucleus | 71.43 | 65.89 |
| Bra011335.1-P | Field mustard | nucleus | 71.85 | 64.53 |
| KRH61761 | Soybean | nucleus | 53.78 | 46.55 |
| KRH52430 | Soybean | nucleus | 53.36 | 45.85 |
| AT3G24150.1 | Thale cress | nucleus | 47.48 | 32.94 |
| Solyc08g059700.1.1 | Tomato | nucleus | 45.8 | 32.15 |
| GSMUA_Achr6P20490_001 | Banana | mitochondrion | 50.0 | 31.48 |
| GSMUA_Achr11P... | Banana | nucleus | 49.58 | 30.89 |
| PGSC0003DMT400082721 | Potato | nucleus | 43.28 | 29.01 |
| VIT_04s0008g05520.t01 | Wine grape | nucleus | 54.62 | 28.82 |
Protein Annotations
| ArrayExpress:AT4G32295 | EMBL:BT003832 | EMBL:BT005186 | EnsemblPlants:AT4G32295.1 | EnsemblPlantsGene:AT4G32295 | EntrezGene:829364 |
| Gene3D:1.10.246.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | PANTHER:PTHR35300 | PANTHER:PTHR35300:SF1 |
| PO:PO:0000293 | ProteinID:AEE86036.1 | RefSeq:AT4G32295 | RefSeq:AT4G32295-TAIR-G | RefSeq:NP_680756.1 | TAIR:AT4G32295 |
| TAIR:AT4G32295.1 | UniParc:UPI000000C18E | UniProt:Q84JY3 | MapMan:15.5.53.5.2 | : | : |
Description
Histone acetyltransferase [Source:UniProtKB/TrEMBL;Acc:Q84JY3]
Coordinates
chr4:+:15592888..15594555
Molecular Weight (calculated)
26999.2 Da
IEP (calculated)
8.553
GRAVY (calculated)
-0.622
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRPGPRPYD CIRRAWHSDR HQPMRGLLIQ EIFRIVCEIH SQSTRKNTEW QEKLPVVVLR AEEIMYSKAN SEAEYMDMKT LLDRTNDAIN TIIRLDETTE
101: TGEFLQPCIE AALHLGCTPR RASRSQRNIN PRCYLSQDST NLDNMLSQVF MKPNNFAPKN LAVAQENCPV SKYSAYPLCY SFRPISDSCK SKNSRPASLI
201: DATNGITFGG CECDLSLRLG PLGPPTQKRS KISSNNNN
101: TGEFLQPCIE AALHLGCTPR RASRSQRNIN PRCYLSQDST NLDNMLSQVF MKPNNFAPKN LAVAQENCPV SKYSAYPLCY SFRPISDSCK SKNSRPASLI
201: DATNGITFGG CECDLSLRLG PLGPPTQKRS KISSNNNN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.