Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69485 | Canola | mitochondrion | 98.31 | 98.76 |
| AT5G15980.1 | Thale cress | mitochondrion | 72.15 | 70.21 |
| Bra001047.1-P | Field mustard | mitochondrion | 63.69 | 63.5 |
| VIT_14s0083g00610.t01 | Wine grape | mitochondrion | 47.08 | 47.08 |
| KRH01461 | Soybean | nucleus | 44.15 | 45.63 |
| KRH45172 | Soybean | mitochondrion | 42.77 | 44.27 |
| PGSC0003DMT400026059 | Potato | mitochondrion | 42.0 | 41.94 |
| GSMUA_Achr1P09410_001 | Banana | mitochondrion | 35.38 | 37.52 |
| TraesCS6D01G149700.1 | Wheat | mitochondrion | 29.85 | 32.6 |
| TraesCS6B01G188700.1 | Wheat | mitochondrion | 30.0 | 32.55 |
| HORVU6Hr1G032550.1 | Barley | plastid | 31.23 | 32.27 |
| EES04708 | Sorghum | mitochondrion, plastid | 29.54 | 31.58 |
| Solyc02g089560.2.1 | Tomato | mitochondrion | 10.31 | 30.73 |
| TraesCS6A01G162500.1 | Wheat | plastid | 30.46 | 30.6 |
| Bra018070.1-P | Field mustard | mitochondrion | 15.08 | 16.31 |
| Bra019536.1-P | Field mustard | mitochondrion | 15.08 | 16.2 |
Protein Annotations
| EnsemblPlants:Bra008660.1 | EnsemblPlants:Bra008660.1-P | EnsemblPlantsGene:Bra008660 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF350 | PFAM:PF01535 | PFscan:PS51375 | SEG:seg | TIGRFAMs:TIGR00756 | UniParc:UPI0002544C33 |
| UniProt:M4CWR3 | MapMan:35.1 | : | : | : | : |
Description
AT5G15980 (E=2e-258) | pentatricopeptide (PPR) repeat-containing protein
Coordinates
chrA10:-:13281499..13283451
Molecular Weight (calculated)
73111.7 Da
IEP (calculated)
7.992
GRAVY (calculated)
-0.338
Length
650 amino acids
Sequence
(BLAST)
(BLAST)
001: MRYQQWRLLL LRIHRASPSP HFQVPSISTR SISSFLHTRS QPRSPQQSQD LPRLRSPITT RTFSSDPAVK TEKSASEATV IDIFTRLSSE DEIKQELESS
101: SIVLTQDLSL KVLRKLESNP DAAKRLFNWA KEASPPTSKS YNMMLRILAG NGLVDEFWGL VSSMKRKGHG LSANVRDKVG DKFRKDGLEK DFIRLRKLFP
201: LDPSYDDCVK VCKVVEKEEW SDDVEKRIRD LNVEFGSDLV KMIVESLDVE PRKALLFFRW VDESGLFKHD EKTYNAVARV LGREKFLDRF QNVVGEMKSA
301: AYEVEIETYA TVSTRFCQSK LIEEAVDLFE IAMAGSNKPT SQCLSLLLKK IVTAKVLDTE LFSRAVEAYT KNGNVLTDGM MKSVLKSLVS VDRVAESNEV
401: LKAMKKGGYL PSSDLQRMIA SELSRKGKKD EADELVDFME ASGTKLDDKA MASLVEGYCD SGDLKEALAS FEKMVGKEGV VSNAGYAFEK LVHAYCNKNQ
501: VRDAYKVLSS QVKQNQVKPL HGTYKCLVRN LLTKKIASEG GFEEALSLLP MMKDHGFPPF VDPFMSYFSK TGTSSEAYSF LKAITSYHFP SISVVMRVFE
601: TMMKSARHSE AQDLLSLCPD YIRNDPDVLE LFYSMKADGS AVEEPLAASS
101: SIVLTQDLSL KVLRKLESNP DAAKRLFNWA KEASPPTSKS YNMMLRILAG NGLVDEFWGL VSSMKRKGHG LSANVRDKVG DKFRKDGLEK DFIRLRKLFP
201: LDPSYDDCVK VCKVVEKEEW SDDVEKRIRD LNVEFGSDLV KMIVESLDVE PRKALLFFRW VDESGLFKHD EKTYNAVARV LGREKFLDRF QNVVGEMKSA
301: AYEVEIETYA TVSTRFCQSK LIEEAVDLFE IAMAGSNKPT SQCLSLLLKK IVTAKVLDTE LFSRAVEAYT KNGNVLTDGM MKSVLKSLVS VDRVAESNEV
401: LKAMKKGGYL PSSDLQRMIA SELSRKGKKD EADELVDFME ASGTKLDDKA MASLVEGYCD SGDLKEALAS FEKMVGKEGV VSNAGYAFEK LVHAYCNKNQ
501: VRDAYKVLSS QVKQNQVKPL HGTYKCLVRN LLTKKIASEG GFEEALSLLP MMKDHGFPPF VDPFMSYFSK TGTSSEAYSF LKAITSYHFP SISVVMRVFE
601: TMMKSARHSE AQDLLSLCPD YIRNDPDVLE LFYSMKADGS AVEEPLAASS
001: MRYQQWRLML LRSYHRSHLP YLSPCSQVTS ISSRSFSSFI HPGIGALQQS EQLCPLRSPM TSSGNLVKSV GRSFSSEPAV EEKSSAEATV IDIFSRLSGE
101: DEIRKELESS GVVISQDLAL KVLRKLESNP DVAKSFFQWI KEASPEELSS KNYNMMLRIL GGNGLVDEFW GLVDVMKKKG HGLSANVRDK VGDKFQKDGL
201: ESDLLRLRKL FTSDCLDNSA ENVCDRVCKI VMKEEWGDDV EKRVRDLNVE FKSDLVKMIV ERLDVEPRKA LLFFRWIDES DLFKHDEKTY NAMARVLGKE
301: KFLDRFQNIV VEMRSAGYEV EIETYVRVST RFCQTKLIKE AVDLFEIAMA GSSSSNNPTP HCFCLLLKKI VTAKILDMDL FSRAVKVYTK NGNALTDSLL
401: KSVLKSLRSV DRVEQSNELL KEMKRGGYVP SGDMQSMIAS SLSRKGKKDE ADEFVDFMES SGNNLDDKAM ASLVEGYCDS GNLDEALVCF EKMVGNTGVS
501: YADYSFEKLV LAYCNKNQVR DAYKLLSAQV TKNQLKPRHS TYKSLVTNLL TKKIARDGGF EEALSLLPIM KDHGFPPFID PFMSYFSSTG KSTEALGFLK
601: AMTSNNFPYI SVVLRVFETM MKSARHSEAQ DLLSLCPNYI RNNPDVLELF NTMKPNESAV EKPLAASA
101: DEIRKELESS GVVISQDLAL KVLRKLESNP DVAKSFFQWI KEASPEELSS KNYNMMLRIL GGNGLVDEFW GLVDVMKKKG HGLSANVRDK VGDKFQKDGL
201: ESDLLRLRKL FTSDCLDNSA ENVCDRVCKI VMKEEWGDDV EKRVRDLNVE FKSDLVKMIV ERLDVEPRKA LLFFRWIDES DLFKHDEKTY NAMARVLGKE
301: KFLDRFQNIV VEMRSAGYEV EIETYVRVST RFCQTKLIKE AVDLFEIAMA GSSSSNNPTP HCFCLLLKKI VTAKILDMDL FSRAVKVYTK NGNALTDSLL
401: KSVLKSLRSV DRVEQSNELL KEMKRGGYVP SGDMQSMIAS SLSRKGKKDE ADEFVDFMES SGNNLDDKAM ASLVEGYCDS GNLDEALVCF EKMVGNTGVS
501: YADYSFEKLV LAYCNKNQVR DAYKLLSAQV TKNQLKPRHS TYKSLVTNLL TKKIARDGGF EEALSLLPIM KDHGFPPFID PFMSYFSSTG KSTEALGFLK
601: AMTSNNFPYI SVVLRVFETM MKSARHSEAQ DLLSLCPNYI RNNPDVLELF NTMKPNESAV EKPLAASA
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g15980, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.