Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G149700.1 | Wheat | mitochondrion | 94.82 | 95.46 |
| HORVU6Hr1G032550.1 | Barley | plastid | 90.82 | 86.49 |
| TraesCS6A01G162500.1 | Wheat | plastid | 90.48 | 83.77 |
| EES04708 | Sorghum | mitochondrion, plastid | 65.94 | 64.97 |
| GSMUA_Achr1P09410_001 | Banana | mitochondrion | 41.57 | 40.62 |
| KRH01461 | Soybean | nucleus | 35.89 | 34.18 |
| VIT_14s0083g00610.t01 | Wine grape | mitochondrion | 35.73 | 32.92 |
| KRH45172 | Soybean | mitochondrion | 33.72 | 32.17 |
| CDX69485 | Canola | mitochondrion | 32.72 | 30.29 |
| Bra008660.1-P | Field mustard | mitochondrion | 32.55 | 30.0 |
| PGSC0003DMT400026059 | Potato | mitochondrion | 32.05 | 29.49 |
| CDY26480 | Canola | mitochondrion | 31.72 | 28.88 |
| Bra001047.1-P | Field mustard | mitochondrion | 30.72 | 28.22 |
| CDX91994 | Canola | mitochondrion | 30.55 | 28.07 |
| CDX74255 | Canola | mitochondrion | 30.38 | 27.91 |
| AT5G15980.1 | Thale cress | mitochondrion | 30.72 | 27.54 |
| AT3G02490.1 | Thale cress | mitochondrion | 29.88 | 26.92 |
| Solyc02g089560.2.1 | Tomato | mitochondrion | 6.18 | 16.97 |
| TraesCS3B01G592800.1 | Wheat | mitochondrion | 15.19 | 15.69 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G188700.1 | EnsemblPlantsGene:TraesCS6B01G188700 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF986 |
| PFAM:PF01535 | PFscan:PS51375 | SEG:seg | TIGRFAMs:TIGR00756 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6B:-:217172872..217174671
Molecular Weight (calculated)
66000.0 Da
IEP (calculated)
8.280
GRAVY (calculated)
-0.035
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRTVLNSGG GRLCRLPSLL PHHRLMSGSS VAAIFFQPSL PADPATAIQS AGIDLSHPNT IPALLVHPDL ASNYPAASRF FSWAASHDAA VLNSKCFNSM
101: LQLAAANSDA AHFWSLVSSM RSKGYGISKT TLQAATESFR SNGMSKDADM IQKAFSAHAR NAAVAEACKI LRSDADEISK LDKLNELGVE VTDEMVALVV
201: EKVGQFPRQA MVFFYWVEQS AGAGINWGKV YNAMAKIIGR EDCIEEFREV LQKMSSKEVG MDKEVYVILI DRFLKRKMFE DAVDLFRFAM GGAEKPSAQD
301: FVFLLKKLVV RDDMDLKLVM SVVRIYQKAG NEVKSSVFDA VIKSLRSVER LGESGRVLKA MEDGGFAPDS TVHGKAVLAM CDAGNLETAH KHLARVEKSG
401: HNLDPLVWSA LVQKYSLGDA VDMAVSCFPE MLERRSGNQV GSALEVLMYG LCRKKEAKEA FKVLKDLVLK KDVVPWQSTY KYLIHKLIRQ GHLKEAFDVL
501: GLMKSNGFPP YIHPFITHIL KSGTVDDALD LLSAMSSKES PSITVYMRLF QGLFKEGRHE IAQQLLSVSP GSVRNHADVL DLFYKTKIEE PAAEAAPVL
101: LQLAAANSDA AHFWSLVSSM RSKGYGISKT TLQAATESFR SNGMSKDADM IQKAFSAHAR NAAVAEACKI LRSDADEISK LDKLNELGVE VTDEMVALVV
201: EKVGQFPRQA MVFFYWVEQS AGAGINWGKV YNAMAKIIGR EDCIEEFREV LQKMSSKEVG MDKEVYVILI DRFLKRKMFE DAVDLFRFAM GGAEKPSAQD
301: FVFLLKKLVV RDDMDLKLVM SVVRIYQKAG NEVKSSVFDA VIKSLRSVER LGESGRVLKA MEDGGFAPDS TVHGKAVLAM CDAGNLETAH KHLARVEKSG
401: HNLDPLVWSA LVQKYSLGDA VDMAVSCFPE MLERRSGNQV GSALEVLMYG LCRKKEAKEA FKVLKDLVLK KDVVPWQSTY KYLIHKLIRQ GHLKEAFDVL
501: GLMKSNGFPP YIHPFITHIL KSGTVDDALD LLSAMSSKES PSITVYMRLF QGLFKEGRHE IAQQLLSVSP GSVRNHADVL DLFYKTKIEE PAAEAAPVL
001: MRYQWRSLLF RSYRSSPRPF LSHHSRFQVI SNSTRSFSSF LHERFGVQQR QCLFALRSPL ASSVSRRFSS ESAIEEKLPA ETVVIDVFSR LNGKDEITKE
101: LDSNDVVISH ELALRVLREL ESSPDVAGRF FKWGLEAYPQ KLSSKSYNTM LRIFGVNGLV DEFWRLVDDM KKKGHGVSAN VRDRVGDKFK KDGLENDLER
201: LKELFASGSM DNSVDKVCNR VCKIVMKEVW GADVEKQLRD LKLEFKSDVV KMVLEKLDVD PRKALLFFRW IDESGSFKHD EKTYNAMARV LGKEKFLDRF
301: QHMIEEIRSA GYEMEMETYV RVSARFCQTK MIKEAVELFE FAMAGSISNT PTPHCCSLLL KKIVTAKKLD MDLFTRTLKA YTGNGNVVPD VMLQHVLKSL
401: RSVDRFGQSN EVLKAMNEGG YVPSGDLQSV IASGLSRKGK KDEANELVNF MEASGNHLDD KAMASLVEGH CDAKDLEEAS ECFKKMIGKE GVSYAGYAFE
501: KLVLAYCNSF QARDVYKLFS ELVKQNQLKP WHSTYKIMVR NLLMKKVARD GGFEEALSLL PMMRNHGFPP FVDPFMDYLS NSGTSAEAFA FLKAVTSKKF
601: PSNSMVLRVF EAMLKSARHS EAQDLLSMSP SYIRRNAEVL ELFNTMKPEK CSLEKPLPAP AQIEA
101: LDSNDVVISH ELALRVLREL ESSPDVAGRF FKWGLEAYPQ KLSSKSYNTM LRIFGVNGLV DEFWRLVDDM KKKGHGVSAN VRDRVGDKFK KDGLENDLER
201: LKELFASGSM DNSVDKVCNR VCKIVMKEVW GADVEKQLRD LKLEFKSDVV KMVLEKLDVD PRKALLFFRW IDESGSFKHD EKTYNAMARV LGKEKFLDRF
301: QHMIEEIRSA GYEMEMETYV RVSARFCQTK MIKEAVELFE FAMAGSISNT PTPHCCSLLL KKIVTAKKLD MDLFTRTLKA YTGNGNVVPD VMLQHVLKSL
401: RSVDRFGQSN EVLKAMNEGG YVPSGDLQSV IASGLSRKGK KDEANELVNF MEASGNHLDD KAMASLVEGH CDAKDLEEAS ECFKKMIGKE GVSYAGYAFE
501: KLVLAYCNSF QARDVYKLFS ELVKQNQLKP WHSTYKIMVR NLLMKKVARD GGFEEALSLL PMMRNHGFPP FVDPFMDYLS NSGTSAEAFA FLKAVTSKKF
601: PSNSMVLRVF EAMLKSARHS EAQDLLSMSP SYIRRNAEVL ELFNTMKPEK CSLEKPLPAP AQIEA
Arabidopsis Description
Pentatricopeptide repeat-containing protein At3g02490, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M891]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.