Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69485 | Canola | mitochondrion | 93.31 | 94.9 |
| AT5G15980.1 | Thale cress | mitochondrion | 71.73 | 70.66 |
| CDX91994 | Canola | mitochondrion | 63.07 | 63.65 |
| CDX74255 | Canola | mitochondrion | 62.92 | 63.5 |
| VIT_14s0083g00610.t01 | Wine grape | mitochondrion | 47.11 | 47.69 |
| KRH01461 | Soybean | nucleus | 43.01 | 44.99 |
| KRH45172 | Soybean | mitochondrion | 41.95 | 43.95 |
| PGSC0003DMT400026059 | Potato | mitochondrion | 41.95 | 42.4 |
| GSMUA_Achr1P09410_001 | Banana | mitochondrion | 34.04 | 36.54 |
| TraesCS6B01G188700.1 | Wheat | mitochondrion | 28.88 | 31.72 |
| TraesCS6D01G149700.1 | Wheat | mitochondrion | 28.42 | 31.43 |
| HORVU6Hr1G032550.1 | Barley | plastid | 29.94 | 31.32 |
| EES04708 | Sorghum | mitochondrion, plastid | 28.72 | 31.09 |
| TraesCS6A01G162500.1 | Wheat | plastid | 29.03 | 29.52 |
| Solyc02g089560.2.1 | Tomato | mitochondrion | 9.73 | 29.36 |
| CDX77895 | Canola | mitochondrion | 15.81 | 17.13 |
| CDY39572 | Canola | mitochondrion | 14.89 | 16.93 |
| CDY48163 | Canola | mitochondrion | 15.05 | 16.47 |
| CDY21816 | Canola | mitochondrion | 15.05 | 16.39 |
Protein Annotations
| EnsemblPlants:CDY26480 | EnsemblPlantsGene:GSBRNA2T00035285001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF350 |
| PFAM:PF01535 | PFscan:PS51375 | ProteinID:CDY26480 | ProteinID:CDY26480.1 | SEG:seg | TIGRFAMs:TIGR00756 |
| UniParc:UPI0004EE14D5 | UniProt:A0A078GJ07 | MapMan:35.1 | : | : | : |
Description
BnaC09g41880DBnaC09g41880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJ07]
Coordinates
chrLK032190:+:355592..357861
Molecular Weight (calculated)
74114.8 Da
IEP (calculated)
7.314
GRAVY (calculated)
-0.354
Length
658 amino acids
Sequence
(BLAST)
(BLAST)
001: MRYQQWRLML LRIHRAYPSP HFQVTSVSTR SISSLLHTRS QPRSPQQSQD LSRLRSPITT RTFSSDPAVR REKSASEATV IDIFTRLSSE DEIKKELESS
101: HIVLTQDLAL KVLRKLESNP DVAKRLFNWA KEAFPTSKSY NMMLRILGGN GLVDEFWGLV SSMKRKGHGL SANVRDKVGD KFRKDGLVKD FIRLRKLFPL
201: DPSDDDSSPE SVCVKVCKVV EKEEWSDDVE KQIRELNVEF GSDLVKMIVE NLDVEPRKAL LFFRWVDESG LFKHDEKTYN AVARVLGREK FLDRFQNVVG
301: EMKSAGYEVE IETYATVSTR FCQSKLIEEA VDLFEIAMEG GSDGNKPTSH CLSLLLKKIV TTKVLDTELF SRAVEAYTKK GNVLTDGMMK SVLKSLISVD
401: KVAESNEVLK AMKKGGYLPS SDLQRVIASE LSRKGKKDEA DELVDFMEAS GTNLDDKAMA SLVEGYCDSG DLKEALASFE KMVGKEGVVS NADHAFEKLV
501: HAYCNKNQVR DAYKLLCSQV KQNQVKPLHS TYKCLVRNLL TKKIASEGGF EEALSLLPMM KDHGFPPFVD PFMSYFSKTG TSSEAYSFLK AITSYHFPSI
601: SVVLRVFETM MKSARQSEAQ DLLSLCPDYI RNDPDVLELF YSMKSDGSAV EEPLAASS
101: HIVLTQDLAL KVLRKLESNP DVAKRLFNWA KEAFPTSKSY NMMLRILGGN GLVDEFWGLV SSMKRKGHGL SANVRDKVGD KFRKDGLVKD FIRLRKLFPL
201: DPSDDDSSPE SVCVKVCKVV EKEEWSDDVE KQIRELNVEF GSDLVKMIVE NLDVEPRKAL LFFRWVDESG LFKHDEKTYN AVARVLGREK FLDRFQNVVG
301: EMKSAGYEVE IETYATVSTR FCQSKLIEEA VDLFEIAMEG GSDGNKPTSH CLSLLLKKIV TTKVLDTELF SRAVEAYTKK GNVLTDGMMK SVLKSLISVD
401: KVAESNEVLK AMKKGGYLPS SDLQRVIASE LSRKGKKDEA DELVDFMEAS GTNLDDKAMA SLVEGYCDSG DLKEALASFE KMVGKEGVVS NADHAFEKLV
501: HAYCNKNQVR DAYKLLCSQV KQNQVKPLHS TYKCLVRNLL TKKIASEGGF EEALSLLPMM KDHGFPPFVD PFMSYFSKTG TSSEAYSFLK AITSYHFPSI
601: SVVLRVFETM MKSARQSEAQ DLLSLCPDYI RNDPDVLELF YSMKSDGSAV EEPLAASS
001: MRYQQWRLML LRSYHRSHLP YLSPCSQVTS ISSRSFSSFI HPGIGALQQS EQLCPLRSPM TSSGNLVKSV GRSFSSEPAV EEKSSAEATV IDIFSRLSGE
101: DEIRKELESS GVVISQDLAL KVLRKLESNP DVAKSFFQWI KEASPEELSS KNYNMMLRIL GGNGLVDEFW GLVDVMKKKG HGLSANVRDK VGDKFQKDGL
201: ESDLLRLRKL FTSDCLDNSA ENVCDRVCKI VMKEEWGDDV EKRVRDLNVE FKSDLVKMIV ERLDVEPRKA LLFFRWIDES DLFKHDEKTY NAMARVLGKE
301: KFLDRFQNIV VEMRSAGYEV EIETYVRVST RFCQTKLIKE AVDLFEIAMA GSSSSNNPTP HCFCLLLKKI VTAKILDMDL FSRAVKVYTK NGNALTDSLL
401: KSVLKSLRSV DRVEQSNELL KEMKRGGYVP SGDMQSMIAS SLSRKGKKDE ADEFVDFMES SGNNLDDKAM ASLVEGYCDS GNLDEALVCF EKMVGNTGVS
501: YADYSFEKLV LAYCNKNQVR DAYKLLSAQV TKNQLKPRHS TYKSLVTNLL TKKIARDGGF EEALSLLPIM KDHGFPPFID PFMSYFSSTG KSTEALGFLK
601: AMTSNNFPYI SVVLRVFETM MKSARHSEAQ DLLSLCPNYI RNNPDVLELF NTMKPNESAV EKPLAASA
101: DEIRKELESS GVVISQDLAL KVLRKLESNP DVAKSFFQWI KEASPEELSS KNYNMMLRIL GGNGLVDEFW GLVDVMKKKG HGLSANVRDK VGDKFQKDGL
201: ESDLLRLRKL FTSDCLDNSA ENVCDRVCKI VMKEEWGDDV EKRVRDLNVE FKSDLVKMIV ERLDVEPRKA LLFFRWIDES DLFKHDEKTY NAMARVLGKE
301: KFLDRFQNIV VEMRSAGYEV EIETYVRVST RFCQTKLIKE AVDLFEIAMA GSSSSNNPTP HCFCLLLKKI VTAKILDMDL FSRAVKVYTK NGNALTDSLL
401: KSVLKSLRSV DRVEQSNELL KEMKRGGYVP SGDMQSMIAS SLSRKGKKDE ADEFVDFMES SGNNLDDKAM ASLVEGYCDS GNLDEALVCF EKMVGNTGVS
501: YADYSFEKLV LAYCNKNQVR DAYKLLSAQV TKNQLKPRHS TYKSLVTNLL TKKIARDGGF EEALSLLPIM KDHGFPPFID PFMSYFSSTG KSTEALGFLK
601: AMTSNNFPYI SVVLRVFETM MKSARHSEAQ DLLSLCPNYI RNNPDVLELF NTMKPNESAV EKPLAASA
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g15980, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.