Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48163 | Canola | mitochondrion | 91.02 | 87.69 |
| CDX77895 | Canola | mitochondrion | 70.64 | 67.38 |
| CDY21816 | Canola | mitochondrion | 69.43 | 66.56 |
| AT3G48250.1 | Thale cress | plastid | 65.98 | 61.51 |
| VIT_17s0000g09330.t01 | Wine grape | mitochondrion | 45.6 | 44.15 |
| KRH03217 | Soybean | mitochondrion | 46.11 | 42.05 |
| PGSC0003DMT400046833 | Potato | mitochondrion | 45.25 | 40.81 |
| GSMUA_Achr8P28550_001 | Banana | cytosol | 34.02 | 39.96 |
| KRH03849 | Soybean | mitochondrion | 43.52 | 39.69 |
| Os01t0970900-01 | Rice | plastid | 34.89 | 35.25 |
| TraesCS3B01G592800.1 | Wheat | mitochondrion | 35.06 | 35.0 |
| HORVU3Hr1G114240.1 | Barley | mitochondrion | 35.75 | 34.97 |
| TraesCS3A01G525400.1 | Wheat | mitochondrion | 35.23 | 34.81 |
| TraesCS3D01G530500.1 | Wheat | mitochondrion | 33.16 | 34.78 |
| Solyc03g112190.2.1 | Tomato | mitochondrion | 44.04 | 34.46 |
| Zm00001d041968_P001 | Maize | mitochondrion | 33.85 | 34.45 |
| EES04293 | Sorghum | mitochondrion | 34.02 | 34.32 |
| KRH03848 | Soybean | cytosol, plastid | 33.16 | 33.33 |
| Zm00001d011788_P001 | Maize | mitochondrion | 32.3 | 31.27 |
| CDX74255 | Canola | mitochondrion | 17.44 | 15.49 |
| CDX91994 | Canola | mitochondrion | 17.1 | 15.18 |
| CDY26480 | Canola | mitochondrion | 16.93 | 14.89 |
| CDX69485 | Canola | mitochondrion | 16.58 | 14.84 |
Protein Annotations
| EnsemblPlants:CDY39572 | EnsemblPlantsGene:GSBRNA2T00068122001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF795 |
| PFAM:PF12854 | PFscan:PS51375 | ProteinID:CDY39572 | ProteinID:CDY39572.1 | TIGRFAMs:TIGR00756 | UniParc:UPI0004EE718C |
| UniProt:A0A078HP02 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng09410DBnaCnng09410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP02]
Coordinates
chrLK032452:-:120842..122623
Molecular Weight (calculated)
66160.5 Da
IEP (calculated)
8.176
GRAVY (calculated)
-0.339
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKSKAVLSS LRNAYSKTSN RSYLSRVQVG FSSSINSPWQ FRSFSSKPES MLQLVLESDW SKEVVEGLRK PDTRLTHETA IYVLRKLAKH PEKAYSFLDW
101: VIRESDLTPS SPLYSTMLRM ILVQQRPMER FRTTLTDMKQ GGFCLDEETY KTIYTLLNRE SYKDAKALAW FYNDNAMYVV ADNVSASVSK QDWGCEVERQ
201: LQGMKLPLSD HNFVIRVLNG LKEHPLKAFS FLRWVGGCYK HSTVTYNAAL RVLARPSSVA EFWSVVDEMK EAGHEVDFDT YIKVSRQFQK SRMMIEAVKL
301: YEFMTDGPFK PSVEDCSLFL KSLSAGPSPD LDLVYRVSRK YESTGKPLSK AVYDGIHRYL TSVSRFDEAG DTMKAMRDAG YEPDNITYSQ LVFGLCKAKR
401: LEEACGILDQ MEADGLFPDV KTWTVLIQGY FKNNEVDKAF ACFENILEKG LVIDSGLLDV MVGMFLSQNR IEEACKFLKE KGVIDKLHEI NKGEEALDLV
501: QMMKKQNHHA RAKKPFDGTA VNVAKMEVRR SENYSPSMSD LIDAFWGLPG LKHLVLTIVK QTRKDVSVMF EVDIQTSPQ
101: VIRESDLTPS SPLYSTMLRM ILVQQRPMER FRTTLTDMKQ GGFCLDEETY KTIYTLLNRE SYKDAKALAW FYNDNAMYVV ADNVSASVSK QDWGCEVERQ
201: LQGMKLPLSD HNFVIRVLNG LKEHPLKAFS FLRWVGGCYK HSTVTYNAAL RVLARPSSVA EFWSVVDEMK EAGHEVDFDT YIKVSRQFQK SRMMIEAVKL
301: YEFMTDGPFK PSVEDCSLFL KSLSAGPSPD LDLVYRVSRK YESTGKPLSK AVYDGIHRYL TSVSRFDEAG DTMKAMRDAG YEPDNITYSQ LVFGLCKAKR
401: LEEACGILDQ MEADGLFPDV KTWTVLIQGY FKNNEVDKAF ACFENILEKG LVIDSGLLDV MVGMFLSQNR IEEACKFLKE KGVIDKLHEI NKGEEALDLV
501: QMMKKQNHHA RAKKPFDGTA VNVAKMEVRR SENYSPSMSD LIDAFWGLPG LKHLVLTIVK QTRKDVSVMF EVDIQTSPQ
001: MYRSMAILSS LRHAYSQIST RSYLSRSKVG FSSNLSSPLD SFAIVPSRFL WKFRTFSSKP DSMLQLVLEN DWSKEVEEGL RKPDMSLTHE TAIYVLRKLE
101: KYPEKAYYFL DWVLRDSGLS PSTPLYSIML RILVQQRSMK RFWMTLREMK QGGFYLDEDT YKTIYGELSK EKSKADAVAV AHFYERMLKE NAMSVVAGEV
201: SAVVTKGDWS CEVERELQEM KLVLSDNFVI RVLKELREHP LKALAFFHWV GGGGSSSGYQ HSTVTYNAAL RVLARPNSVA EFWSVVDEMK TAGYDMDLDT
301: YIKVSRQFQK SRMMAETVKL YEYMMDGPFK PSIQDCSLLL RYLSGSPNPD LDLVFRVSRK YESTGKSLSK AVYDGIHRSL TSVGRFDEAE EITKAMRNAG
401: YEPDNITYSQ LVFGLCKAKR LEEARGVLDQ MEAQGCFPDI KTWTILIQGH CKNNELDKAL ACFANMLEKG FDIDSNLLDV LIDGFVIHNK FEGASIFLME
501: MVKNANVKPW QSTYKLLIDK LLKIKKSEEA LDLLQMMKKQ NYPAYAEAFD GYLAKFGTLE DAKKFLDVLS SKDSPSFAAY FHVIEAFYRE GRLTDAKNLL
601: FICPHHFKTH PKISELFGAA A
101: KYPEKAYYFL DWVLRDSGLS PSTPLYSIML RILVQQRSMK RFWMTLREMK QGGFYLDEDT YKTIYGELSK EKSKADAVAV AHFYERMLKE NAMSVVAGEV
201: SAVVTKGDWS CEVERELQEM KLVLSDNFVI RVLKELREHP LKALAFFHWV GGGGSSSGYQ HSTVTYNAAL RVLARPNSVA EFWSVVDEMK TAGYDMDLDT
301: YIKVSRQFQK SRMMAETVKL YEYMMDGPFK PSIQDCSLLL RYLSGSPNPD LDLVFRVSRK YESTGKSLSK AVYDGIHRSL TSVGRFDEAE EITKAMRNAG
401: YEPDNITYSQ LVFGLCKAKR LEEARGVLDQ MEAQGCFPDI KTWTILIQGH CKNNELDKAL ACFANMLEKG FDIDSNLLDV LIDGFVIHNK FEGASIFLME
501: MVKNANVKPW QSTYKLLIDK LLKIKKSEEA LDLLQMMKKQ NYPAYAEAFD GYLAKFGTLE DAKKFLDVLS SKDSPSFAAY FHVIEAFYRE GRLTDAKNLL
601: FICPHHFKTH PKISELFGAA A
Arabidopsis Description
Pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STK5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.