Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G592800.1 | Wheat | mitochondrion | 91.89 | 93.79 |
| TraesCS3D01G530500.1 | Wheat | mitochondrion | 86.66 | 92.93 |
| TraesCS3A01G525400.1 | Wheat | mitochondrion | 87.84 | 88.74 |
| Os01t0970900-01 | Rice | plastid | 71.79 | 74.17 |
| Zm00001d041968_P001 | Maize | mitochondrion | 64.02 | 66.61 |
| EES04293 | Sorghum | mitochondrion | 62.33 | 64.29 |
| Zm00001d011788_P001 | Maize | mitochondrion | 61.49 | 60.87 |
| GSMUA_Achr8P28550_001 | Banana | cytosol | 50.0 | 60.04 |
| VIT_17s0000g09330.t01 | Wine grape | mitochondrion | 45.78 | 45.32 |
| CDX77895 | Canola | mitochondrion | 42.57 | 41.52 |
| Bra019536.1-P | Field mustard | mitochondrion | 42.4 | 41.49 |
| CDY21816 | Canola | mitochondrion | 42.23 | 41.39 |
| AT3G48250.1 | Thale cress | plastid | 42.23 | 40.26 |
| KRH03217 | Soybean | mitochondrion | 41.05 | 38.27 |
| PGSC0003DMT400046833 | Potato | mitochondrion | 41.39 | 38.16 |
| KRH03849 | Soybean | mitochondrion | 38.85 | 36.22 |
| Bra018070.1-P | Field mustard | mitochondrion | 36.32 | 35.77 |
| CDY39572 | Canola | mitochondrion | 34.97 | 35.75 |
| CDY48163 | Canola | mitochondrion | 35.98 | 35.44 |
| Solyc03g112190.2.1 | Tomato | mitochondrion | 39.02 | 31.22 |
| KRH03848 | Soybean | cytosol, plastid | 29.22 | 30.03 |
| HORVU6Hr1G032550.1 | Barley | plastid | 16.39 | 15.42 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EMBL:AK367356 | UniProt:F2DTY8 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009987 | EnsemblPlantsGene:HORVU3Hr1G114240 |
| EnsemblPlants:HORVU3Hr1G114240.1 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF12854 | PFscan:PS51375 |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF795 | InterPro:Pentatricopeptide_repeat | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0002007053 |
| SEG:seg | : | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DTY8]
Coordinates
chrchr3H:-:690416248..690421349
Molecular Weight (calculated)
65966.3 Da
IEP (calculated)
6.621
GRAVY (calculated)
-0.282
Length
592 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPASSAH LRRLLLPHLR RNRLFSALTE TPPLPPPAPA PTTDAVLYSL RGLSKDPPQA LSLFRRAAAS GHPLGPAAYN LMLRTLASTP AAAQAHFWPF
101: LRDMEAAGHS VDQGTYLAAL ASFKRASLTT DYATLSARLA KSRADHAAAG GTPLTAAADA VRGLDLELDQ AGLDEELERK LEGVAEQLMP LTEAAVAGVL
201: REARDVPSKA LAFFRWAGRQ RGYEHGSVAY NAMARVLGRE DSLREFWELV QEMKAGGVHV DIDTYMKLSR QFQKRHMMTE AVELYELMMD GPYKPAQQDG
301: PLLLRRIAMG PEPDLELVYR VVRKFEAVYE FKTKNVFDGI HRALTSNGRF DEAAEIVERM RTAGHQPDNI TYSQLIFGLC KAAKCDEARQ VLDEMEAEGC
401: TPDLKTWTML IQGHCAAGEV DKALQYLTEM IEKDLEADAD LLDVMVKGLC RQDKFDAAYT LFVEMVDNAK LTPWQGTYKH IIAELLRVKK LEEALALLKS
501: MKARKFPPFA DPFPSNIAEY GTLEDARDFL KALKGSSNNY PQPPTYVQIF KAFFAEGRYS EAQDLLYKCP IHIRRHHDVI ELFEPKKAEA TA
101: LRDMEAAGHS VDQGTYLAAL ASFKRASLTT DYATLSARLA KSRADHAAAG GTPLTAAADA VRGLDLELDQ AGLDEELERK LEGVAEQLMP LTEAAVAGVL
201: REARDVPSKA LAFFRWAGRQ RGYEHGSVAY NAMARVLGRE DSLREFWELV QEMKAGGVHV DIDTYMKLSR QFQKRHMMTE AVELYELMMD GPYKPAQQDG
301: PLLLRRIAMG PEPDLELVYR VVRKFEAVYE FKTKNVFDGI HRALTSNGRF DEAAEIVERM RTAGHQPDNI TYSQLIFGLC KAAKCDEARQ VLDEMEAEGC
401: TPDLKTWTML IQGHCAAGEV DKALQYLTEM IEKDLEADAD LLDVMVKGLC RQDKFDAAYT LFVEMVDNAK LTPWQGTYKH IIAELLRVKK LEEALALLKS
501: MKARKFPPFA DPFPSNIAEY GTLEDARDFL KALKGSSNNY PQPPTYVQIF KAFFAEGRYS EAQDLLYKCP IHIRRHHDVI ELFEPKKAEA TA
001: MYRSMAILSS LRHAYSQIST RSYLSRSKVG FSSNLSSPLD SFAIVPSRFL WKFRTFSSKP DSMLQLVLEN DWSKEVEEGL RKPDMSLTHE TAIYVLRKLE
101: KYPEKAYYFL DWVLRDSGLS PSTPLYSIML RILVQQRSMK RFWMTLREMK QGGFYLDEDT YKTIYGELSK EKSKADAVAV AHFYERMLKE NAMSVVAGEV
201: SAVVTKGDWS CEVERELQEM KLVLSDNFVI RVLKELREHP LKALAFFHWV GGGGSSSGYQ HSTVTYNAAL RVLARPNSVA EFWSVVDEMK TAGYDMDLDT
301: YIKVSRQFQK SRMMAETVKL YEYMMDGPFK PSIQDCSLLL RYLSGSPNPD LDLVFRVSRK YESTGKSLSK AVYDGIHRSL TSVGRFDEAE EITKAMRNAG
401: YEPDNITYSQ LVFGLCKAKR LEEARGVLDQ MEAQGCFPDI KTWTILIQGH CKNNELDKAL ACFANMLEKG FDIDSNLLDV LIDGFVIHNK FEGASIFLME
501: MVKNANVKPW QSTYKLLIDK LLKIKKSEEA LDLLQMMKKQ NYPAYAEAFD GYLAKFGTLE DAKKFLDVLS SKDSPSFAAY FHVIEAFYRE GRLTDAKNLL
601: FICPHHFKTH PKISELFGAA A
101: KYPEKAYYFL DWVLRDSGLS PSTPLYSIML RILVQQRSMK RFWMTLREMK QGGFYLDEDT YKTIYGELSK EKSKADAVAV AHFYERMLKE NAMSVVAGEV
201: SAVVTKGDWS CEVERELQEM KLVLSDNFVI RVLKELREHP LKALAFFHWV GGGGSSSGYQ HSTVTYNAAL RVLARPNSVA EFWSVVDEMK TAGYDMDLDT
301: YIKVSRQFQK SRMMAETVKL YEYMMDGPFK PSIQDCSLLL RYLSGSPNPD LDLVFRVSRK YESTGKSLSK AVYDGIHRSL TSVGRFDEAE EITKAMRNAG
401: YEPDNITYSQ LVFGLCKAKR LEEARGVLDQ MEAQGCFPDI KTWTILIQGH CKNNELDKAL ACFANMLEKG FDIDSNLLDV LIDGFVIHNK FEGASIFLME
501: MVKNANVKPW QSTYKLLIDK LLKIKKSEEA LDLLQMMKKQ NYPAYAEAFD GYLAKFGTLE DAKKFLDVLS SKDSPSFAAY FHVIEAFYRE GRLTDAKNLL
601: FICPHHFKTH PKISELFGAA A
Arabidopsis Description
Pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STK5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.