Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G592800.1 | Wheat | mitochondrion | 95.47 | 90.86 |
| HORVU3Hr1G114240.1 | Barley | mitochondrion | 92.93 | 86.66 |
| TraesCS3A01G525400.1 | Wheat | mitochondrion | 91.67 | 86.35 |
| Os01t0970900-01 | Rice | plastid | 73.55 | 70.86 |
| Zm00001d041968_P001 | Maize | mitochondrion | 65.22 | 63.27 |
| EES04293 | Sorghum | mitochondrion | 63.95 | 61.5 |
| GSMUA_Achr8P28550_001 | Banana | cytosol | 53.99 | 60.45 |
| Zm00001d011788_P001 | Maize | mitochondrion | 62.86 | 58.03 |
| VIT_17s0000g09330.t01 | Wine grape | mitochondrion | 47.64 | 43.98 |
| CDX77895 | Canola | mitochondrion | 43.48 | 39.54 |
| Bra019536.1-P | Field mustard | mitochondrion | 43.3 | 39.5 |
| CDY21816 | Canola | mitochondrion | 43.12 | 39.4 |
| AT3G48250.1 | Thale cress | plastid | 42.57 | 37.84 |
| KRH03217 | Soybean | mitochondrion | 43.3 | 37.64 |
| PGSC0003DMT400046833 | Potato | mitochondrion | 42.03 | 36.14 |
| KRH03849 | Soybean | mitochondrion | 40.4 | 35.12 |
| CDY39572 | Canola | mitochondrion | 34.78 | 33.16 |
| Bra018070.1-P | Field mustard | mitochondrion | 36.05 | 33.11 |
| CDY48163 | Canola | mitochondrion | 35.69 | 32.78 |
| Solyc03g112190.2.1 | Tomato | mitochondrion | 39.49 | 29.46 |
| KRH03848 | Soybean | cytosol, plastid | 30.07 | 28.82 |
| TraesCS6D01G149700.1 | Wheat | mitochondrion | 16.3 | 15.13 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009987 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 |
| PFAM:PF12854 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF795 | InterPro:Pentatricopeptide_repeat | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | EnsemblPlantsGene:TraesCS3D01G530500 | EnsemblPlants:TraesCS3D01G530500.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3D:+:607087987..607089964
Molecular Weight (calculated)
61889.5 Da
IEP (calculated)
6.620
GRAVY (calculated)
-0.296
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPAHLRR LLLPHLRRNR LFFRRAAAAG HPLGPAAYNL MLRTLASTPA AARAHFWPFL RDMDAAGHSV DQGTYLAALA SFKRASLATD YATLSARLAK
101: SRDDHAAQAA AGGTPVTSLA DAVRGLDLDQ PGADEALEEK LEGVAEQLLP LTEAAVAGVL REARDVPAKA LAFFRWAGRQ NGYEHGSVAY NAMARVLGRE
201: ESLREFWELI QEMKTGELHI DIDTYMKLSR QFQKRHMMTE AVELYELMMD GPYKPAQQDG PLLLRRIAMG PEPDLELVYR VVRKFEAVYE FKTKNVFDGI
301: HRALTSNGRF DEAAEIVERM RAAGHQPDNI TYSQLVFGLC KATKCDEARQ VLDEMEAEGC TPDLKTWTML IQGHCAAGEV DKALQYLTEM IEKDLEADAD
401: LLDVMVKGLC KQEKIDAAYT LFVEMVDTAK LNPWQGTYKH IIAELLRVKK LEEALGLLKS MKARKFPPFA DPFPSNIAEY GTLEDARDFL KALKGSSNNY
501: PQPPVYVQMF KAFFAEGRYS EAQDLLYKCP IHIRRHHDIT ELFEPKKVQA TA
101: SRDDHAAQAA AGGTPVTSLA DAVRGLDLDQ PGADEALEEK LEGVAEQLLP LTEAAVAGVL REARDVPAKA LAFFRWAGRQ NGYEHGSVAY NAMARVLGRE
201: ESLREFWELI QEMKTGELHI DIDTYMKLSR QFQKRHMMTE AVELYELMMD GPYKPAQQDG PLLLRRIAMG PEPDLELVYR VVRKFEAVYE FKTKNVFDGI
301: HRALTSNGRF DEAAEIVERM RAAGHQPDNI TYSQLVFGLC KATKCDEARQ VLDEMEAEGC TPDLKTWTML IQGHCAAGEV DKALQYLTEM IEKDLEADAD
401: LLDVMVKGLC KQEKIDAAYT LFVEMVDTAK LNPWQGTYKH IIAELLRVKK LEEALGLLKS MKARKFPPFA DPFPSNIAEY GTLEDARDFL KALKGSSNNY
501: PQPPVYVQMF KAFFAEGRYS EAQDLLYKCP IHIRRHHDIT ELFEPKKVQA TA
001: MYRSMAILSS LRHAYSQIST RSYLSRSKVG FSSNLSSPLD SFAIVPSRFL WKFRTFSSKP DSMLQLVLEN DWSKEVEEGL RKPDMSLTHE TAIYVLRKLE
101: KYPEKAYYFL DWVLRDSGLS PSTPLYSIML RILVQQRSMK RFWMTLREMK QGGFYLDEDT YKTIYGELSK EKSKADAVAV AHFYERMLKE NAMSVVAGEV
201: SAVVTKGDWS CEVERELQEM KLVLSDNFVI RVLKELREHP LKALAFFHWV GGGGSSSGYQ HSTVTYNAAL RVLARPNSVA EFWSVVDEMK TAGYDMDLDT
301: YIKVSRQFQK SRMMAETVKL YEYMMDGPFK PSIQDCSLLL RYLSGSPNPD LDLVFRVSRK YESTGKSLSK AVYDGIHRSL TSVGRFDEAE EITKAMRNAG
401: YEPDNITYSQ LVFGLCKAKR LEEARGVLDQ MEAQGCFPDI KTWTILIQGH CKNNELDKAL ACFANMLEKG FDIDSNLLDV LIDGFVIHNK FEGASIFLME
501: MVKNANVKPW QSTYKLLIDK LLKIKKSEEA LDLLQMMKKQ NYPAYAEAFD GYLAKFGTLE DAKKFLDVLS SKDSPSFAAY FHVIEAFYRE GRLTDAKNLL
601: FICPHHFKTH PKISELFGAA A
101: KYPEKAYYFL DWVLRDSGLS PSTPLYSIML RILVQQRSMK RFWMTLREMK QGGFYLDEDT YKTIYGELSK EKSKADAVAV AHFYERMLKE NAMSVVAGEV
201: SAVVTKGDWS CEVERELQEM KLVLSDNFVI RVLKELREHP LKALAFFHWV GGGGSSSGYQ HSTVTYNAAL RVLARPNSVA EFWSVVDEMK TAGYDMDLDT
301: YIKVSRQFQK SRMMAETVKL YEYMMDGPFK PSIQDCSLLL RYLSGSPNPD LDLVFRVSRK YESTGKSLSK AVYDGIHRSL TSVGRFDEAE EITKAMRNAG
401: YEPDNITYSQ LVFGLCKAKR LEEARGVLDQ MEAQGCFPDI KTWTILIQGH CKNNELDKAL ACFANMLEKG FDIDSNLLDV LIDGFVIHNK FEGASIFLME
501: MVKNANVKPW QSTYKLLIDK LLKIKKSEEA LDLLQMMKKQ NYPAYAEAFD GYLAKFGTLE DAKKFLDVLS SKDSPSFAAY FHVIEAFYRE GRLTDAKNLL
601: FICPHHFKTH PKISELFGAA A
Arabidopsis Description
Pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STK5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.