Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74255 | Canola | mitochondrion | 95.71 | 95.71 |
| AT3G02490.1 | Thale cress | mitochondrion | 82.36 | 80.75 |
| CDX69485 | Canola | mitochondrion | 63.65 | 64.14 |
| CDY26480 | Canola | mitochondrion | 63.65 | 63.07 |
| VIT_14s0083g00610.t01 | Wine grape | mitochondrion | 46.93 | 47.08 |
| KRH01461 | Soybean | nucleus | 45.25 | 46.9 |
| KRH45172 | Soybean | mitochondrion | 44.48 | 46.18 |
| PGSC0003DMT400026059 | Potato | mitochondrion | 42.33 | 42.4 |
| GSMUA_Achr1P09410_001 | Banana | mitochondrion | 34.51 | 36.7 |
| EES04708 | Sorghum | mitochondrion, plastid | 29.14 | 31.25 |
| Solyc02g089560.2.1 | Tomato | mitochondrion | 10.28 | 30.73 |
| TraesCS6B01G188700.1 | Wheat | mitochondrion | 28.07 | 30.55 |
| TraesCS6D01G149700.1 | Wheat | mitochondrion | 27.76 | 30.42 |
| HORVU6Hr1G032550.1 | Barley | plastid | 29.14 | 30.21 |
| TraesCS6A01G162500.1 | Wheat | plastid | 28.83 | 29.06 |
| CDX77895 | Canola | mitochondrion | 17.48 | 18.78 |
| CDY21816 | Canola | mitochondrion | 16.87 | 18.21 |
| CDY48163 | Canola | mitochondrion | 15.8 | 17.14 |
| CDY39572 | Canola | mitochondrion | 15.18 | 17.1 |
Protein Annotations
| EnsemblPlants:CDX91994 | EnsemblPlantsGene:GSBRNA2T00153646001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | ncoils:Coil | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF350 | PFAM:PF01535 | PFscan:PS51375 | ProteinID:CDX91994 | ProteinID:CDX91994.1 | SEG:seg |
| TIGRFAMs:TIGR00756 | UniParc:UPI0004EE8CED | MapMan:35.1 | : | : | : |
Description
BnaC03g32960D
Coordinates
chrLK031870:+:1165609..1167613
Molecular Weight (calculated)
74079.6 Da
IEP (calculated)
8.499
GRAVY (calculated)
-0.301
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MRYQWRLILL RSYRSSFCSR FQVISNSTRS LTSLLHKPPG FAPPQQSQCL YSINRSFSYK PVIEEKPSPE AIVIDVFTRL STKNEINKEL DSNCIVISHD
101: LALNALRSLE TTPDVAQRLF HWVSEASPKK LSSKSYNTML RILGVNGLVD EFWSLVDDMK KRGHGVSANV RDKVGVKFQE DGLESDLNRL KELFASGSID
201: NSVDKVCNRV CKIVMKDQWN AELEKQLRDL KLEFKSDLVK MVVEKLDVEP RKALLFFRWI DECGGFKHDE KTYNAVARVL GKEKFLDRFR NVIEEIRSGG
301: FEMEMETYVR VSARFCQSKM VREAVELFEF AMAGRNTPTA HCCCLLLKKI VTTKKLDMDL FSRTVKAYTC NGNVMTDQML QSVIKSLRSV DRFEQSNEVL
401: KAMKEGGYVP SGDLQSVIAS GLSRKGKKDE ANELVDFMEA SGDHLDDKAM ASLVEGHCDA KDLEEASECF KKMVGKEGVS YAGYAFEKLV LAYCNSFQAR
501: DAYKLFTELV KQNQLKPWHS TYKIMVRNLL MKKVARDGGF EEALSLLPMM RNHGFPPFVD PFLDYLSNSG TGAEAFAFLK ALTSKKFPSN LMVMRLFEAM
601: LKSARHSEAQ DLLSLCPSYI RRNADVLQLF SSMKPDQCSL EKPLPAPTQI EA
101: LALNALRSLE TTPDVAQRLF HWVSEASPKK LSSKSYNTML RILGVNGLVD EFWSLVDDMK KRGHGVSANV RDKVGVKFQE DGLESDLNRL KELFASGSID
201: NSVDKVCNRV CKIVMKDQWN AELEKQLRDL KLEFKSDLVK MVVEKLDVEP RKALLFFRWI DECGGFKHDE KTYNAVARVL GKEKFLDRFR NVIEEIRSGG
301: FEMEMETYVR VSARFCQSKM VREAVELFEF AMAGRNTPTA HCCCLLLKKI VTTKKLDMDL FSRTVKAYTC NGNVMTDQML QSVIKSLRSV DRFEQSNEVL
401: KAMKEGGYVP SGDLQSVIAS GLSRKGKKDE ANELVDFMEA SGDHLDDKAM ASLVEGHCDA KDLEEASECF KKMVGKEGVS YAGYAFEKLV LAYCNSFQAR
501: DAYKLFTELV KQNQLKPWHS TYKIMVRNLL MKKVARDGGF EEALSLLPMM RNHGFPPFVD PFLDYLSNSG TGAEAFAFLK ALTSKKFPSN LMVMRLFEAM
601: LKSARHSEAQ DLLSLCPSYI RRNADVLQLF SSMKPDQCSL EKPLPAPTQI EA
001: MRYQWRSLLF RSYRSSPRPF LSHHSRFQVI SNSTRSFSSF LHERFGVQQR QCLFALRSPL ASSVSRRFSS ESAIEEKLPA ETVVIDVFSR LNGKDEITKE
101: LDSNDVVISH ELALRVLREL ESSPDVAGRF FKWGLEAYPQ KLSSKSYNTM LRIFGVNGLV DEFWRLVDDM KKKGHGVSAN VRDRVGDKFK KDGLENDLER
201: LKELFASGSM DNSVDKVCNR VCKIVMKEVW GADVEKQLRD LKLEFKSDVV KMVLEKLDVD PRKALLFFRW IDESGSFKHD EKTYNAMARV LGKEKFLDRF
301: QHMIEEIRSA GYEMEMETYV RVSARFCQTK MIKEAVELFE FAMAGSISNT PTPHCCSLLL KKIVTAKKLD MDLFTRTLKA YTGNGNVVPD VMLQHVLKSL
401: RSVDRFGQSN EVLKAMNEGG YVPSGDLQSV IASGLSRKGK KDEANELVNF MEASGNHLDD KAMASLVEGH CDAKDLEEAS ECFKKMIGKE GVSYAGYAFE
501: KLVLAYCNSF QARDVYKLFS ELVKQNQLKP WHSTYKIMVR NLLMKKVARD GGFEEALSLL PMMRNHGFPP FVDPFMDYLS NSGTSAEAFA FLKAVTSKKF
601: PSNSMVLRVF EAMLKSARHS EAQDLLSMSP SYIRRNAEVL ELFNTMKPEK CSLEKPLPAP AQIEA
101: LDSNDVVISH ELALRVLREL ESSPDVAGRF FKWGLEAYPQ KLSSKSYNTM LRIFGVNGLV DEFWRLVDDM KKKGHGVSAN VRDRVGDKFK KDGLENDLER
201: LKELFASGSM DNSVDKVCNR VCKIVMKEVW GADVEKQLRD LKLEFKSDVV KMVLEKLDVD PRKALLFFRW IDESGSFKHD EKTYNAMARV LGKEKFLDRF
301: QHMIEEIRSA GYEMEMETYV RVSARFCQTK MIKEAVELFE FAMAGSISNT PTPHCCSLLL KKIVTAKKLD MDLFTRTLKA YTGNGNVVPD VMLQHVLKSL
401: RSVDRFGQSN EVLKAMNEGG YVPSGDLQSV IASGLSRKGK KDEANELVNF MEASGNHLDD KAMASLVEGH CDAKDLEEAS ECFKKMIGKE GVSYAGYAFE
501: KLVLAYCNSF QARDVYKLFS ELVKQNQLKP WHSTYKIMVR NLLMKKVARD GGFEEALSLL PMMRNHGFPP FVDPFMDYLS NSGTSAEAFA FLKAVTSKKF
601: PSNSMVLRVF EAMLKSARHS EAQDLLSMSP SYIRRNAEVL ELFNTMKPEK CSLEKPLPAP AQIEA
Arabidopsis Description
Pentatricopeptide repeat-containing protein At3g02490, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M891]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.