Factsheet for Bra013373.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78918	Canola	cytosol	95.8	95.4
CDY70054	Canola	nucleus	92.44	57.59
AT4G19060.1	Thale cress	cytosol	59.66	37.08
GSMUA_Achr1P08690_001	Banana	mitochondrion	21.43	28.49
Bra021980.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.08	24.73
GSMUA_Achr1P08716_001	Banana	cytosol	27.73	16.38
TraesCS3D01G322300.1	Wheat	cytosol	25.63	15.6
TraesCS3B01G358800.1	Wheat	extracellular	25.21	15.35
Os01t0798900-00	Rice	cytosol	24.79	14.86
EES01602	Sorghum	cytosol	24.37	14.08
Zm00001d043199_P001	Maize	cytosol	23.11	13.38

Protein Annotations

EnsemblPlants:Bra013373.1	EnsemblPlants:Bra013373.1-P	EnsemblPlantsGene:Bra013373	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	SUPFAM:SSF52540
UniParc:UPI0002546454	UniProt:M4DA63	MapMan:35.1	:	:	:

Description

AT4G19060 (E=2e-063) | disease resistance protein-related

Coordinates

chrA01:-:5263301..5264017

Molecular Weight (calculated)

27259.9 Da

IEP (calculated)

4.546

GRAVY (calculated)

-0.961

Length

238 amino acids

Sequence
(BLAST)

001: MYSEETREEG DQKVAVLKRI LRSLGVEDEA LDSIRTEADE EKRKNAEEGR RDEETVKEKE LFRLLNALNS NLFGKRYLIV LDDVWEDNEW SQRLDGEETQ
101: QEKTHLSCGF PKGSGGRVIV TSRDEGLAKK IVGEEENVQR LFPRSDVESV WEIYKDAFGE PMKDENGEVV KDAAGEPMKD AVEKHVIGED GRPTKWVVNP
201: RYPGRYKKEL MDKSGGVPWA AQMLAKIEPL KNDEDKDM

Best Arabidopsis Sequence Match ( AT4G19060.1 )
(BLAST)

001: MDIAKKFISE IDDKLESKSE FDKELEKIKS SFNEEYEKWS SGKQRGSSSK HGNQSTHGDS SPTRNSSGSS KKGRPKANRV ETSSELPDHL IRGFINEKLF
101: LKNFLLKQKE SEEFKTLAIV GKYGVGKTTL CQAVFNDEDV KQVYFPRIWV SMYSKETKED EDPKIDVVKR ILRSLGVEDE MFKHIKTEAE EEKSIKDEAG
201: EREEETVKEK ELARLLYALH LNLIGKKYLI VLDDVWEDNE WDQRLDDEKK QQEKSHLSCG FPKGFGGKVI MTSRDERLAK AIVGEEENLQ RLFPRSDAES
301: LWEIYIDAVP TKVDDAAATN LGDAVATNAG DAVAPKVNPR YPGRYKQELM DKSCGIPLAA RMLAKIEPVK VDEIGNIDRK QSF

Arabidopsis Description

Probable disease resistance protein At4g19060 [Source:UniProtKB/Swiss-Prot;Acc:Q84WD3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.