Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013373.1-P | Field mustard | nucleus | 95.4 | 95.8 |
| CDY70054 | Canola | nucleus | 92.05 | 57.59 |
| CDY26370 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 38.49 | 37.7 |
| AT4G19060.1 | Thale cress | cytosol | 59.41 | 37.08 |
| GSMUA_Achr1P08690_001 | Banana | mitochondrion | 21.76 | 29.05 |
| CDY65474 | Canola | cytosol | 39.75 | 25.4 |
| GSMUA_Achr1P08716_001 | Banana | cytosol | 28.03 | 16.63 |
| TraesCS3D01G322300.1 | Wheat | cytosol | 25.94 | 15.86 |
| TraesCS3B01G358800.1 | Wheat | extracellular | 25.52 | 15.6 |
| Os01t0798900-00 | Rice | cytosol | 25.1 | 15.11 |
| EES01602 | Sorghum | cytosol | 24.69 | 14.32 |
| Zm00001d043199_P001 | Maize | cytosol | 23.43 | 13.63 |
Protein Annotations
| EnsemblPlants:CDX78918 | EnsemblPlantsGene:GSBRNA2T00131408001 | Gene3D:3.40.50.300 | GO:A0A078CUR2 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF863 |
| PFAM:PF00931 | ProteinID:CDX78918 | ProteinID:CDX78918.1 | SUPFAM:SSF52540 | UniParc:UPI0004EDDA88 | MapMan:35.1 |
Description
BnaA01g09850D
Coordinates
chrLK031816:-:810226..811367
Molecular Weight (calculated)
27232.9 Da
IEP (calculated)
4.584
GRAVY (calculated)
-0.977
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSGETKEDE GDQKGAVLKR ILRSLGVEDE ALDSIRTEAD EEKRKNAEEG RRDEETVKEK ELFRLLNALN SNLFGKRYLI VLDDVWEDNE WSQRLDGEET
101: QQEKTHLSCG FPKGSGGRVI VTSRDEGLAK KIVGEEEKVQ RLFPRSDVES VWEIYKDAFG EPMKDENGEV VKDAAGEPMK DAVEKHVIGD DGRPTKWVVN
201: PRYPGRYKKE LMDKSGGVPW AAQMLAKIEP LKNDEDKDM
101: QQEKTHLSCG FPKGSGGRVI VTSRDEGLAK KIVGEEEKVQ RLFPRSDVES VWEIYKDAFG EPMKDENGEV VKDAAGEPMK DAVEKHVIGD DGRPTKWVVN
201: PRYPGRYKKE LMDKSGGVPW AAQMLAKIEP LKNDEDKDM
001: MDIAKKFISE IDDKLESKSE FDKELEKIKS SFNEEYEKWS SGKQRGSSSK HGNQSTHGDS SPTRNSSGSS KKGRPKANRV ETSSELPDHL IRGFINEKLF
101: LKNFLLKQKE SEEFKTLAIV GKYGVGKTTL CQAVFNDEDV KQVYFPRIWV SMYSKETKED EDPKIDVVKR ILRSLGVEDE MFKHIKTEAE EEKSIKDEAG
201: EREEETVKEK ELARLLYALH LNLIGKKYLI VLDDVWEDNE WDQRLDDEKK QQEKSHLSCG FPKGFGGKVI MTSRDERLAK AIVGEEENLQ RLFPRSDAES
301: LWEIYIDAVP TKVDDAAATN LGDAVATNAG DAVAPKVNPR YPGRYKQELM DKSCGIPLAA RMLAKIEPVK VDEIGNIDRK QSF
101: LKNFLLKQKE SEEFKTLAIV GKYGVGKTTL CQAVFNDEDV KQVYFPRIWV SMYSKETKED EDPKIDVVKR ILRSLGVEDE MFKHIKTEAE EEKSIKDEAG
201: EREEETVKEK ELARLLYALH LNLIGKKYLI VLDDVWEDNE WDQRLDDEKK QQEKSHLSCG FPKGFGGKVI MTSRDERLAK AIVGEEENLQ RLFPRSDAES
301: LWEIYIDAVP TKVDDAAATN LGDAVATNAG DAVAPKVNPR YPGRYKQELM DKSCGIPLAA RMLAKIEPVK VDEIGNIDRK QSF
Arabidopsis Description
Probable disease resistance protein At4g19060 [Source:UniProtKB/Swiss-Prot;Acc:Q84WD3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.