Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G52155.1 | CDY04768 | AT1G22920.1 | 21798944 |
| AT3G52155.1 | CDY21400 | AT1G22920.1 | 21798944 |
| AT3G52155.1 | CDY25761 | AT1G22920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012818.1-P | Field mustard | plastid | 98.63 | 98.63 |
| CDY29066 | Canola | plastid | 97.72 | 98.17 |
| AT3G52155.1 | Thale cress | plastid | 83.56 | 83.94 |
| KRH11677 | Soybean | plastid | 59.36 | 58.3 |
| KRH36679 | Soybean | plastid | 59.82 | 56.96 |
| EER98643 | Sorghum | plastid | 58.9 | 53.31 |
| TraesCS5B01G174000.1 | Wheat | mitochondrion, plastid | 55.25 | 51.71 |
| Zm00001d019980_P001 | Maize | plastid | 56.62 | 51.67 |
| TraesCS5D01G181000.1 | Wheat | mitochondrion, plastid | 55.71 | 51.26 |
| Zm00001d005520_P001 | Maize | plastid | 58.9 | 50.99 |
| TraesCS5A01G174800.1 | Wheat | mitochondrion, plastid | 55.25 | 50.42 |
| PGSC0003DMT400070128 | Potato | cytosol | 56.62 | 50.41 |
| Solyc04g015330.2.1 | Tomato | plastid | 56.62 | 50.41 |
| Os09t0287300-01 | Rice | plastid | 56.62 | 49.21 |
| VIT_00s0875g00010.t01 | Wine grape | plastid | 52.05 | 48.72 |
| HORVU5Hr1G053740.1 | Barley | plastid | 51.14 | 46.47 |
Protein Annotations
| EnsemblPlants:CDX90616 | EnsemblPlantsGene:GSBRNA2T00151257001 | Gene3D:3.40.50.1240 | InterPro:His_PPase_superfam | InterPro:His_Pase_superF_clade-1 | InterPro:IPR029033 |
| PANTHER:PTHR23029 | PANTHER:PTHR23029:SF49 | PFAM:PF00300 | ProteinID:CDX90616 | ProteinID:CDX90616.1 | SEG:seg |
| SMART:SM00855 | SUPFAM:SSF53254 | UniParc:UPI0004EDFD56 | MapMan:35.1 | : | : |
Description
BnaA03g41650D
Coordinates
chrLK031863:-:1122008..1123144
Molecular Weight (calculated)
23626.1 Da
IEP (calculated)
7.266
GRAVY (calculated)
-0.064
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSFQCPSPF FFSGQNRTTT TSCSTAPPRA STELTASPSS LISRRLILLR HAHSSWDHLS LKDHDRPLTK TGHADAAKVA QILSSLGWLP QLILSSDATR
101: TKETLKSMQA QVDGFMEANV HFIPSFYSIA AMDGQTADHL QHIISKYSSP DITTVMCMGH NKGWEEAASM LSGASVKLKT CNAALLLAFG NSWDDAFSLA
201: GPGGWKLEGI VAPDSTICV
101: TKETLKSMQA QVDGFMEANV HFIPSFYSIA AMDGQTADHL QHIISKYSSP DITTVMCMGH NKGWEEAASM LSGASVKLKT CNAALLLAFG NSWDDAFSLA
201: GPGGWKLEGI VAPDSTICV
001: MLSLQCLPPF FISVPNRSTN SCSTAPLRAV SDFAASPSTS ISRRLILLRH AHSSWDDLSL RDHDRPLSKT GEADAAKVAQ ILSSLGWLPQ LILSSDATRT
101: RETLKSMQAQ VDGFMEANVH FIPSFYSIAA MDGQTAEHLQ NIISKYSTPD ISTIMCMGHN KGWEEAASML SGASIKLKTC NAALLQAFGN SWEEAFALSG
201: PGGWKLEGLV APDSSIFV
101: RETLKSMQAQ VDGFMEANVH FIPSFYSIAA MDGQTAEHLQ NIISKYSTPD ISTIMCMGHN KGWEEAASML SGASIKLKTC NAALLQAFGN SWEEAFALSG
201: PGGWKLEGLV APDSSIFV
Arabidopsis Description
Uncharacterized protein At3g52155, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94BY1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.