Factsheet for Os09t0287300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0654700-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52155.1	Os04t0654700-02	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G174000.1	Wheat	mitochondrion, plastid	73.02	78.63
TraesCS5D01G181000.1	Wheat	mitochondrion, plastid	73.02	77.31
EER98643	Sorghum	plastid	74.21	77.27
TraesCS5A01G174800.1	Wheat	mitochondrion, plastid	72.62	76.25
Zm00001d019980_P001	Maize	plastid	69.84	73.33
Zm00001d005520_P001	Maize	plastid	72.62	72.33
HORVU5Hr1G053740.1	Barley	plastid	67.06	70.12
KRH11677	Soybean	plastid	53.57	60.54
KRH36679	Soybean	plastid	52.78	57.83
CDX90616	Canola	plastid	49.21	56.62
AT3G52155.1	Thale cress	plastid	48.81	56.42
CDY29066	Canola	plastid	48.41	55.96
Bra012818.1-P	Field mustard	plastid	48.41	55.71
VIT_00s0875g00010.t01	Wine grape	plastid	50.0	53.85
PGSC0003DMT400070128	Potato	cytosol	49.21	50.41
Solyc04g015330.2.1	Tomato	plastid	48.81	50.0

Protein Annotations

Gene3D:3.40.50.1240	MapMan:35.1	EntrezGene:9268343	UniProt:A0A0N7KQI0	ProteinID:BAT07274.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0016791	InterPro:His_PPase_superfam	InterPro:His_Pase_superF_clade-1	InterPro:IPR029033	EnsemblPlantsGene:Os09g0287300
EnsemblPlants:Os09t0287300-01	PFAM:PF00300	PANTHER:PTHR23029	PANTHER:PTHR23029:SF49	SMART:SM00855	SUPFAM:SSF53254
UniParc:UPI0001C7B025	RefSeq:XP_015610764.1	SEG:seg	:	:	:

Description

Similar to predicted protein. (Os09t0287300-01)

Coordinates

chr9:-:6434671..6438886

Molecular Weight (calculated)

26332.8 Da

IEP (calculated)

8.770

GRAVY (calculated)

0.013

Length

252 amino acids

Sequence
(BLAST)

001: MRPPPAPLSG RASPPPHLLL LSNSSLAPSL PTVAAACRMP PAAAAAARSV SVSVSTAVDA PTAAAAEPAR GDAAPAPAAP PRRRLILLRH GESAAGGRLT
101: RDHDRPLSKA GRAAAISVSN KLQQMGWIPE LVLCSDATRT KETLKILQDH VKGLSEAIVH FIPSFYSIAA MDGQTAEHLQ KAICQYSSDE ILTVMCMGHN
201: KGWEEAASMF SGDSVVLKTC NAALLEAEGK SWVEAFSLAG LGGWKLHGIV KP

Best Arabidopsis Sequence Match ( AT3G52155.1 )
(BLAST)

001: MLSLQCLPPF FISVPNRSTN SCSTAPLRAV SDFAASPSTS ISRRLILLRH AHSSWDDLSL RDHDRPLSKT GEADAAKVAQ ILSSLGWLPQ LILSSDATRT
101: RETLKSMQAQ VDGFMEANVH FIPSFYSIAA MDGQTAEHLQ NIISKYSTPD ISTIMCMGHN KGWEEAASML SGASIKLKTC NAALLQAFGN SWEEAFALSG
201: PGGWKLEGLV APDSSIFV

Arabidopsis Description

Uncharacterized protein At3g52155, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94BY1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.