Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G181000.1 | Wheat | mitochondrion, plastid | 91.29 | 92.44 |
| TraesCS5B01G174000.1 | Wheat | mitochondrion, plastid | 88.38 | 91.03 |
| TraesCS5A01G174800.1 | Wheat | mitochondrion, plastid | 90.46 | 90.83 |
| Os09t0287300-01 | Rice | plastid | 70.12 | 67.06 |
| EER98643 | Sorghum | plastid | 66.39 | 66.12 |
| Zm00001d019980_P001 | Maize | plastid | 65.15 | 65.42 |
| Zm00001d005520_P001 | Maize | plastid | 65.56 | 62.45 |
| KRH11677 | Soybean | plastid | 50.62 | 54.71 |
| KRH36679 | Soybean | plastid | 51.45 | 53.91 |
| VIT_00s0875g00010.t01 | Wine grape | plastid | 51.04 | 52.56 |
| AT3G52155.1 | Thale cress | plastid | 47.3 | 52.29 |
| CDY29066 | Canola | plastid | 46.47 | 51.38 |
| Bra012818.1-P | Field mustard | plastid | 46.47 | 51.14 |
| CDX90616 | Canola | plastid | 46.47 | 51.14 |
| PGSC0003DMT400070128 | Potato | cytosol | 49.79 | 48.78 |
| Solyc04g015330.2.1 | Tomato | plastid | 49.38 | 48.37 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G053740.1 | EnsemblPlantsGene:HORVU5Hr1G053740 | Gene3D:3.40.50.1240 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:His_PPase_superfam | InterPro:His_Pase_superF_clade-1 | InterPro:IPR029033 |
| PANTHER:PTHR23029 | PANTHER:PTHR23029:SF49 | PFAM:PF00300 | PFscan:PS51257 | SEG:seg | SUPFAM:SSF53254 |
| UniParc:UPI000B486129 | UniProt:A0A287R9B2 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:422233724..422236809
Molecular Weight (calculated)
25861.8 Da
IEP (calculated)
7.205
GRAVY (calculated)
-0.110
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRAPPRLPS PPSSATAPHL LLYASSAACR LPPSAAAVAR SVSVSTTVVD APAAAAEPGS SDSASATPRR RLILLRHGDS AVGERFTRDH DRPLSKSGRA
101: DAISVSDKFH KMGWIPELIL CSDATRTKET LQIMQEHVQG LSQSLVHFIP SFYSIAAMDG QTAEHLQKAI CEYSTDEILT VMCMGHNKGW EEAASMFSGD
201: SVVLKTCNAA LLEAAGKSWI EGFFAGWSWG MEASRNCKAI N
101: DAISVSDKFH KMGWIPELIL CSDATRTKET LQIMQEHVQG LSQSLVHFIP SFYSIAAMDG QTAEHLQKAI CEYSTDEILT VMCMGHNKGW EEAASMFSGD
201: SVVLKTCNAA LLEAAGKSWI EGFFAGWSWG MEASRNCKAI N
001: MLSLQCLPPF FISVPNRSTN SCSTAPLRAV SDFAASPSTS ISRRLILLRH AHSSWDDLSL RDHDRPLSKT GEADAAKVAQ ILSSLGWLPQ LILSSDATRT
101: RETLKSMQAQ VDGFMEANVH FIPSFYSIAA MDGQTAEHLQ NIISKYSTPD ISTIMCMGHN KGWEEAASML SGASIKLKTC NAALLQAFGN SWEEAFALSG
201: PGGWKLEGLV APDSSIFV
101: RETLKSMQAQ VDGFMEANVH FIPSFYSIAA MDGQTAEHLQ NIISKYSTPD ISTIMCMGHN KGWEEAASML SGASIKLKTC NAALLQAFGN SWEEAFALSG
201: PGGWKLEGLV APDSSIFV
Arabidopsis Description
Uncharacterized protein At3g52155, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94BY1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.