Factsheet for Bra012818.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012351.1-P
Bra024548.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52155.1	Bra012351.1-P	AT1G22920.1	21798944
AT3G52155.1	Bra024548.1-P	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29066	Canola	plastid	99.09	99.54
CDX90616	Canola	plastid	98.63	98.63
AT3G52155.1	Thale cress	plastid	83.56	83.94
KRH11677	Soybean	plastid	59.82	58.74
KRH36679	Soybean	plastid	60.27	57.39
EER98643	Sorghum	plastid	57.99	52.48
Zm00001d019980_P001	Maize	plastid	56.62	51.67
TraesCS5B01G174000.1	Wheat	mitochondrion, plastid	54.79	51.28
TraesCS5D01G181000.1	Wheat	mitochondrion, plastid	55.25	50.84
Zm00001d005520_P001	Maize	plastid	58.45	50.59
PGSC0003DMT400070128	Potato	cytosol	56.16	50.0
Solyc04g015330.2.1	Tomato	plastid	56.16	50.0
TraesCS5A01G174800.1	Wheat	mitochondrion, plastid	54.79	50.0
VIT_00s0875g00010.t01	Wine grape	plastid	52.05	48.72
Os09t0287300-01	Rice	plastid	55.71	48.41
HORVU5Hr1G053740.1	Barley	plastid	51.14	46.47

Protein Annotations

EnsemblPlants:Bra012818.1	EnsemblPlants:Bra012818.1-P	EnsemblPlantsGene:Bra012818	Gene3D:3.40.50.1240	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:His_PPase_superfam	InterPro:His_Pase_superF_clade-1
InterPro:IPR029033	PANTHER:PTHR23029	PANTHER:PTHR23029:SF49	PFAM:PF00300	SEG:seg	SMART:SM00855
SUPFAM:SSF53254	UniParc:UPI0002540762	UniProt:M4D8K8	MapMan:35.1	:	:

Description

AT3G52155 (E=8e-092) | LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078); Has 1050 Blast hits to 1050 proteins in 239 species: Archae - 0; Bacteria - 476; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink).

Coordinates

chrA03:+:22085790..22086751

Molecular Weight (calculated)

23619.2 Da

IEP (calculated)

7.219

GRAVY (calculated)

-0.063

Length

219 amino acids

Sequence
(BLAST)

001: MLSFQCPSPF FFSGQNRTTT TSCSTAPPRA STELTASPSS LISRRLILLR HAHSSWDHLS LKDHDRPLTK TGQADAAKVA QILSSLGWLP QLILSSDATR
101: TKETLKSMQA QVDGFMEANV HFIPSFYSIA AMDGQTADHL QHIISKYSSP DITTVMCMGH NKGWEEAASM LSGASVKLKT CNAALLLAFG NSWDDAFAMA
201: GPGGWKLEGI VAPDSTICV

Best Arabidopsis Sequence Match ( AT3G52155.1 )
(BLAST)

001: MLSLQCLPPF FISVPNRSTN SCSTAPLRAV SDFAASPSTS ISRRLILLRH AHSSWDDLSL RDHDRPLSKT GEADAAKVAQ ILSSLGWLPQ LILSSDATRT
101: RETLKSMQAQ VDGFMEANVH FIPSFYSIAA MDGQTAEHLQ NIISKYSTPD ISTIMCMGHN KGWEEAASML SGASIKLKTC NAALLQAFGN SWEEAFALSG
201: PGGWKLEGLV APDSSIFV

Arabidopsis Description

Uncharacterized protein At3g52155, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94BY1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.