Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81218 | Canola | cytosol, nucleus, plasma membrane | 97.81 | 99.92 |
| Bra037770.1-P | Field mustard | cytosol, nucleus, plasma membrane | 99.92 | 97.24 |
| PGSC0003DMT400048954 | Potato | mitochondrion | 29.98 | 96.35 |
| CDY43804 | Canola | cytosol, peroxisome, plasma membrane | 63.53 | 93.44 |
| CDX84510 | Canola | nucleus, peroxisome, plasma membrane | 20.42 | 93.33 |
| Solyc10g081090.1.1 | Tomato | nucleus | 9.48 | 92.13 |
| CDX84511 | Canola | cytosol | 40.92 | 91.99 |
| AT5G64270.1 | Thale cress | cytosol, nucleus, plasma membrane | 91.73 | 89.2 |
| KRH21266 | Soybean | nucleus | 81.2 | 87.21 |
| VIT_08s0040g00270.t01 | Wine grape | cytosol, nucleus, plasma membrane | 86.79 | 84.26 |
| HORVU0Hr1G009840.1 | Barley | cytosol, nucleus, plasma membrane | 23.99 | 84.09 |
| PGSC0003DMT400072223 | Potato | cytosol, nucleus, plasma membrane | 85.01 | 83.32 |
| KRH11024 | Soybean | nucleus | 68.88 | 82.52 |
| Solyc10g081070.1.1 | Tomato | nucleus | 40.52 | 73.1 |
| CDY43803 | Canola | nucleus | 19.94 | 71.3 |
| CDX84509 | Canola | plastid | 15.07 | 58.31 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:16.4.1.2.4.1 | UniProt:A0A078G243 | InterPro:ARM-like | InterPro:ARM-type_fold | EnsemblPlants:CDY18718 |
| ProteinID:CDY18718 | ProteinID:CDY18718.1 | ncoils:Coil | GO:GO:0000245 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:GSBRNA2T00005804001 | InterPro:HEAT_type_2 | InterPro:IPR011989 | InterPro:IPR021133 |
| PFAM:PF08920 | PFscan:PS50077 | PANTHER:PTHR12097 | InterPro:SF3b_su1 | InterPro:SF3b_su1-like | SMART:SM01349 |
| SUPFAM:SSF48371 | InterPro:TOG | UniParc:UPI0004EECE42 | SEG:seg | : | : |
Description
BnaA09g06770DBnaA09g06770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G243]
Coordinates
chrLK032087:-:681440..685414
Molecular Weight (calculated)
137450.0 Da
IEP (calculated)
5.689
GRAVY (calculated)
-0.283
Length
1234 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADLDPEIAK TQEERRKIEA ELASLTSVNF DRDLYGGNDR DSYVTSIAPN DEEDSNLDAT GSLVAQRLAS YTAPKSILND VARAHVEDDD DGGFKPRQTI
0101: AEREGDYRNR RLNRVLSPDR VDPFAMGEKT PDPSVRTYND HMRETAQKDS GAPAASSKRR NRWDHAEEDG GGGKKAKASD SDWDVADSAP GIGKWDATPG
0201: RAGDATPSAG RRGRNRWDET PTPGRVTDSD ATPGGGVTWD ATPKGSATPT PKRQRSRWDE TPATMGSATP MGGMTPTAAY TPGVTPFGGI DMATPTPSQL
0301: NLRGAMTPEQ YNLARWEKDI EERNRPLSDE ELDAMFPTEG YKVLDPPASY VPVRTPARKA MGTPTPMTTP GYVIPEEHRG QQFDVPQELP DGLPFMKPED
0401: YQYFAALLNE ENEEELSPDE QKERKIMKLL LKVKNGTPAQ RKTALRQLTD KARELGAGPL FNKILPLLMQ PTLEDQERHL LVKVIDRILY KLDELVRPFV
0501: HKILVVIEPL LIDEDYYARV EGREIISNLS KAAGLATMIA AMRPDIDNID EYVRNTTARA FSVVASALGI PALLPFLKAV CQSKKSWQAR HTGIKIVQQI
0601: AILIGCAVLP HLRSLVEIIE HGLSDENQKV RTITALSLAA LAEAAAPYGI ESFDSVLKPL WKGIRSHRGK VLAAFLKAIG FIIPLMDAIY ASYYTKEVMV
0701: ILIREFQSPD EEMKKIVLKV VKQCVSTEGV EPDYIRSDIL PEFFKHFWVR RMALEKRNYK QLVETTVEIA NKVGVADIVA RVVEDLKDES EPYRRMVMET
0801: IDKVITNLGA SDIDSRLEEL LIDGILYAFQ EQTTDDTNVM LNGFGAVVNG LGQRVKPYLP QICGTIKWRL NNKSAKVRQQ AADLISRIAV VMKQCGEEQL
0901: MGHLGVVLYE YLGEEYPEVL GSILGALKAI VNVIGMTKMT PPIKDLLPRL TPILKNRHEK VQENCIDLVG RIADRGAEFV PAREWMRICF ELLEMLKAHK
1001: KGIRRATVNT FGYIAKAIGP QDVLATLLNN LKVQERQNRV CTTVAIAIVA ETCSPFTVLP ALMNEYRVPE LNVQNGVLKS LSFLFEYIGE MGKDYIYAVT
1101: PLLEDALMDR DLVHRQTAAS AVKHMALGVA GLGCEDALVH LLNFIWPNIF ETSPHVINAV MEAIEGMRVA LGAAVILNYC LQGLFHPARK VREVYWKIYN
1201: SLYIGAQDTL VAAYPVLEDE QNNVYSRPEL TMFV
0101: AEREGDYRNR RLNRVLSPDR VDPFAMGEKT PDPSVRTYND HMRETAQKDS GAPAASSKRR NRWDHAEEDG GGGKKAKASD SDWDVADSAP GIGKWDATPG
0201: RAGDATPSAG RRGRNRWDET PTPGRVTDSD ATPGGGVTWD ATPKGSATPT PKRQRSRWDE TPATMGSATP MGGMTPTAAY TPGVTPFGGI DMATPTPSQL
0301: NLRGAMTPEQ YNLARWEKDI EERNRPLSDE ELDAMFPTEG YKVLDPPASY VPVRTPARKA MGTPTPMTTP GYVIPEEHRG QQFDVPQELP DGLPFMKPED
0401: YQYFAALLNE ENEEELSPDE QKERKIMKLL LKVKNGTPAQ RKTALRQLTD KARELGAGPL FNKILPLLMQ PTLEDQERHL LVKVIDRILY KLDELVRPFV
0501: HKILVVIEPL LIDEDYYARV EGREIISNLS KAAGLATMIA AMRPDIDNID EYVRNTTARA FSVVASALGI PALLPFLKAV CQSKKSWQAR HTGIKIVQQI
0601: AILIGCAVLP HLRSLVEIIE HGLSDENQKV RTITALSLAA LAEAAAPYGI ESFDSVLKPL WKGIRSHRGK VLAAFLKAIG FIIPLMDAIY ASYYTKEVMV
0701: ILIREFQSPD EEMKKIVLKV VKQCVSTEGV EPDYIRSDIL PEFFKHFWVR RMALEKRNYK QLVETTVEIA NKVGVADIVA RVVEDLKDES EPYRRMVMET
0801: IDKVITNLGA SDIDSRLEEL LIDGILYAFQ EQTTDDTNVM LNGFGAVVNG LGQRVKPYLP QICGTIKWRL NNKSAKVRQQ AADLISRIAV VMKQCGEEQL
0901: MGHLGVVLYE YLGEEYPEVL GSILGALKAI VNVIGMTKMT PPIKDLLPRL TPILKNRHEK VQENCIDLVG RIADRGAEFV PAREWMRICF ELLEMLKAHK
1001: KGIRRATVNT FGYIAKAIGP QDVLATLLNN LKVQERQNRV CTTVAIAIVA ETCSPFTVLP ALMNEYRVPE LNVQNGVLKS LSFLFEYIGE MGKDYIYAVT
1101: PLLEDALMDR DLVHRQTAAS AVKHMALGVA GLGCEDALVH LLNFIWPNIF ETSPHVINAV MEAIEGMRVA LGAAVILNYC LQGLFHPARK VREVYWKIYN
1201: SLYIGAQDTL VAAYPVLEDE QNNVYSRPEL TMFV
0001: MADLDPEIAK TQEERRKMEA DLASLTSLTF DRDLYGGNDR ASYSTSIAPN EEDDANLDTT GSLVAQRLAS YTAPRSILND VARPHNEDDD VGFKPRQSIA
0101: EREGEYRNRR LNRVLSPDRV DAFAMGDKTP DASVRTYTDH MRETALQREK EETMRLIAKK KKEEEEAAAK HQKDSAPPPP ASSSSSSSKR RHRWDLPEED
0201: GAAAKKAKAA SSDWDLPDAA PGIGRWDAPT PGRVSDATPS AGRRNRWDET PTPGRVTDSD ATPGGGVTPG ATPSGVTWDG LATPTPKRQR SRWDETPATM
0301: GSATPMGGVT PGAAYTPGVT PIGGIDMATP TPGQLIFRGP MTPEQLNMQR WEKDIEERNR PLSDEELDAM FPKDGYKVLD PPATYVPIRT PARKLQQTPT
0401: PMATPGYVIP EENRGQQYDV PPEVPGGLPF MKPEDYQYFG SLLNEENEEE LSPEEQKERK IMKLLLKVKN GTPPQRKTAL RQLTDKAREL GAGPLFNKIL
0501: PLLMQPTLED QERHLLVKVI DRILYKLDEM VRPYVHKILV VIEPLLIDED YYARVEGREI ISNLSKAAGL ASMIAAMRPD IDNIDEYVRN TTARAFSVVA
0601: SALGIPALLP FLKAVCQSKR SWQARHTGIK IVQQIAILIG CAVLPHLRSL VEIIEHGLSD ENQKVRTITA LSLAALAEAA APYGIESFDS VLKPLWKGIR
0701: SHRGKVLAAF LKAIGFIIPL MDAIYASYYT KEVMVILIRE FQSPDEEMKK IVLKVVKQCV STEGVEPEYI RSDILPEFFR NFWTRKMALE RRNYKQLVET
0801: TVEVANKVGV ADIVGRVVED LKDESEQYRR MVMETIDKVV TNLGASDIDA RLEELLIDGI LYAFQEQTSD DANVMLNGFG AVVNALGQRV KPYLPQICGT
0901: IKWRLNNKSA KVRQQAADLI SRIAVVMKQC GEEQLMGHLG VVLYEYLGEE YPEVLGSILG ALKAIVNVIG MTKMTPPIKD LLPRLTPILK NRHEKVQENC
1001: IDLVGRIADR GAEFVPAREW MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA IAIVAETCSP FTVLPALMNE
1101: YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVTPLLED ALMDRDLVHR QTAASAVKHM ALGVAGLGCE DALVHLLNFI WPNIFETSPH VINAVMEAIE
1201: GMRVALGAAV ILNYCLQGLF HPARKVREVY WKIYNSLYIG AQDTLVAAYP VLEDEQNNVY SRPELTMFV
0101: EREGEYRNRR LNRVLSPDRV DAFAMGDKTP DASVRTYTDH MRETALQREK EETMRLIAKK KKEEEEAAAK HQKDSAPPPP ASSSSSSSKR RHRWDLPEED
0201: GAAAKKAKAA SSDWDLPDAA PGIGRWDAPT PGRVSDATPS AGRRNRWDET PTPGRVTDSD ATPGGGVTPG ATPSGVTWDG LATPTPKRQR SRWDETPATM
0301: GSATPMGGVT PGAAYTPGVT PIGGIDMATP TPGQLIFRGP MTPEQLNMQR WEKDIEERNR PLSDEELDAM FPKDGYKVLD PPATYVPIRT PARKLQQTPT
0401: PMATPGYVIP EENRGQQYDV PPEVPGGLPF MKPEDYQYFG SLLNEENEEE LSPEEQKERK IMKLLLKVKN GTPPQRKTAL RQLTDKAREL GAGPLFNKIL
0501: PLLMQPTLED QERHLLVKVI DRILYKLDEM VRPYVHKILV VIEPLLIDED YYARVEGREI ISNLSKAAGL ASMIAAMRPD IDNIDEYVRN TTARAFSVVA
0601: SALGIPALLP FLKAVCQSKR SWQARHTGIK IVQQIAILIG CAVLPHLRSL VEIIEHGLSD ENQKVRTITA LSLAALAEAA APYGIESFDS VLKPLWKGIR
0701: SHRGKVLAAF LKAIGFIIPL MDAIYASYYT KEVMVILIRE FQSPDEEMKK IVLKVVKQCV STEGVEPEYI RSDILPEFFR NFWTRKMALE RRNYKQLVET
0801: TVEVANKVGV ADIVGRVVED LKDESEQYRR MVMETIDKVV TNLGASDIDA RLEELLIDGI LYAFQEQTSD DANVMLNGFG AVVNALGQRV KPYLPQICGT
0901: IKWRLNNKSA KVRQQAADLI SRIAVVMKQC GEEQLMGHLG VVLYEYLGEE YPEVLGSILG ALKAIVNVIG MTKMTPPIKD LLPRLTPILK NRHEKVQENC
1001: IDLVGRIADR GAEFVPAREW MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA IAIVAETCSP FTVLPALMNE
1101: YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVTPLLED ALMDRDLVHR QTAASAVKHM ALGVAGLGCE DALVHLLNFI WPNIFETSPH VINAVMEAIE
1201: GMRVALGAAV ILNYCLQGLF HPARKVREVY WKIYNSLYIG AQDTLVAAYP VLEDEQNNVY SRPELTMFV
Arabidopsis Description
Nuclear protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FMF9]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.