Factsheet for AT5G64270.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 2
nucleus 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0146400-01	Rice	cytosol, nucleus	27.19	96.37
PGSC0003DMT400048954	Potato	mitochondrion	29.16	96.35
Solyc10g081090.1.1	Tomato	nucleus	9.22	92.13
CDY18718	Canola	cytosol, nucleus, plasma membrane	89.2	91.73
CDX81218	Canola	cytosol, nucleus, plasma membrane	87.16	91.56
Bra037770.1-P	Field mustard	cytosol, nucleus, plasma membrane	91.41	91.48
KRH21266	Soybean	nucleus	80.3	88.69
Bra024281.1-P	Field mustard	nucleus	84.48	86.1
VIT_08s0040g00270.t01	Wine grape	cytosol, nucleus, plasma membrane	85.19	85.05
PGSC0003DMT400072223	Potato	cytosol, nucleus, plasma membrane	83.77	84.43
KRH11024	Soybean	nucleus	68.09	83.88
HORVU0Hr1G009840.1	Barley	cytosol, nucleus, plasma membrane	23.17	83.52
GSMUA_Achr10P...	Banana	nucleus	49.96	82.77
Os02t0478900-00	Rice	nucleus	60.44	82.74
EES04510	Sorghum	cytosol, nucleus, plasma membrane	82.74	82.03
Zm00001d053882_P001	Maize	plastid	82.51	81.8
TraesCS6A01G115900.1	Wheat	golgi	81.95	81.12
TraesCS6B01G143700.1	Wheat	cytosol, nucleus, plasma membrane	81.95	81.12
TraesCS6D01G104700.1	Wheat	nucleus	81.95	81.12
Zm00001d015248_P018	Maize	cytosol, nucleus, plasma membrane	82.51	79.8
KXG31550	Sorghum	cytosol, nucleus, plasma membrane	79.98	78.87
TraesCS5B01G017300.1	Wheat	cytosol, nucleus, plasma membrane	79.2	77.91
TraesCS5D01G025300.1	Wheat	nucleus	74.86	77.49
Solyc10g081070.1.1	Tomato	nucleus	40.43	75.0
Os02t0147300-01	Rice	nucleus	6.54	44.86

Protein Annotations

Gene3D:1.25.10.10	MapMan:16.4.1.2.4.1	EntrezGene:836548	ProteinID:AED97864.1	InterPro:ARM-like	InterPro:ARM-type_fold
ArrayExpress:AT5G64270	EnsemblPlantsGene:AT5G64270	RefSeq:AT5G64270	TAIR:AT5G64270	RefSeq:AT5G64270-TAIR-G	EnsemblPlants:AT5G64270.1
TAIR:AT5G64270.1	ProteinID:BAB09858.1	ncoils:Coil	GO:GO:0000245	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003729	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005686	GO:GO:0005689	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016043	GO:GO:0071004
GO:GO:0071013	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	RefSeq:NP_201232.1	PFAM:PF08920
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS50077
PANTHER:PTHR12097	UniProt:Q9FMF9	InterPro:SF3b_su1	InterPro:SF3b_su1-like	SMART:SM01349	SUPFAM:SSF48371
InterPro:TOG	UniParc:UPI000009F36D	SEG:seg	:	:	:

Description

Nuclear protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FMF9]

Coordinates

chr5:+:25706608..25711355

Molecular Weight (calculated)

141458.0 Da

IEP (calculated)

5.954

GRAVY (calculated)

-0.304

Length

1269 amino acids

Sequence
(BLAST)

0001: MADLDPEIAK TQEERRKMEA DLASLTSLTF DRDLYGGNDR ASYSTSIAPN EEDDANLDTT GSLVAQRLAS YTAPRSILND VARPHNEDDD VGFKPRQSIA
0101: EREGEYRNRR LNRVLSPDRV DAFAMGDKTP DASVRTYTDH MRETALQREK EETMRLIAKK KKEEEEAAAK HQKDSAPPPP ASSSSSSSKR RHRWDLPEED
0201: GAAAKKAKAA SSDWDLPDAA PGIGRWDAPT PGRVSDATPS AGRRNRWDET PTPGRVTDSD ATPGGGVTPG ATPSGVTWDG LATPTPKRQR SRWDETPATM
0301: GSATPMGGVT PGAAYTPGVT PIGGIDMATP TPGQLIFRGP MTPEQLNMQR WEKDIEERNR PLSDEELDAM FPKDGYKVLD PPATYVPIRT PARKLQQTPT
0401: PMATPGYVIP EENRGQQYDV PPEVPGGLPF MKPEDYQYFG SLLNEENEEE LSPEEQKERK IMKLLLKVKN GTPPQRKTAL RQLTDKAREL GAGPLFNKIL
0501: PLLMQPTLED QERHLLVKVI DRILYKLDEM VRPYVHKILV VIEPLLIDED YYARVEGREI ISNLSKAAGL ASMIAAMRPD IDNIDEYVRN TTARAFSVVA
0601: SALGIPALLP FLKAVCQSKR SWQARHTGIK IVQQIAILIG CAVLPHLRSL VEIIEHGLSD ENQKVRTITA LSLAALAEAA APYGIESFDS VLKPLWKGIR
0701: SHRGKVLAAF LKAIGFIIPL MDAIYASYYT KEVMVILIRE FQSPDEEMKK IVLKVVKQCV STEGVEPEYI RSDILPEFFR NFWTRKMALE RRNYKQLVET
0801: TVEVANKVGV ADIVGRVVED LKDESEQYRR MVMETIDKVV TNLGASDIDA RLEELLIDGI LYAFQEQTSD DANVMLNGFG AVVNALGQRV KPYLPQICGT
0901: IKWRLNNKSA KVRQQAADLI SRIAVVMKQC GEEQLMGHLG VVLYEYLGEE YPEVLGSILG ALKAIVNVIG MTKMTPPIKD LLPRLTPILK NRHEKVQENC
1001: IDLVGRIADR GAEFVPAREW MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA IAIVAETCSP FTVLPALMNE
1101: YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVTPLLED ALMDRDLVHR QTAASAVKHM ALGVAGLGCE DALVHLLNFI WPNIFETSPH VINAVMEAIE
1201: GMRVALGAAV ILNYCLQGLF HPARKVREVY WKIYNSLYIG AQDTLVAAYP VLEDEQNNVY SRPELTMFV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.