Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0146400-01 | Rice | cytosol, nucleus | 26.74 | 96.37 |
| TraesCS5D01G025300.1 | Wheat | nucleus | 90.39 | 95.11 |
| HORVU7Hr1G022470.3 | Barley | cytosol | 36.82 | 92.95 |
| HORVU6Hr1G065110.1 | Barley | cytosol | 36.36 | 90.37 |
| TraesCS6B01G143700.1 | Wheat | cytosol, nucleus, plasma membrane | 89.38 | 89.94 |
| CDY43804 | Canola | cytosol, peroxisome, plasma membrane | 57.6 | 88.56 |
| CDX84510 | Canola | nucleus, peroxisome, plasma membrane | 18.37 | 87.78 |
| Solyc07g041790.1.1 | Tomato | cytosol, nucleus | 4.96 | 87.67 |
| EES04510 | Sorghum | cytosol, nucleus, plasma membrane | 86.98 | 87.66 |
| CDX84511 | Canola | cytosol | 37.21 | 87.43 |
| Zm00001d053882_P001 | Maize | plastid | 86.74 | 87.42 |
| KRH21266 | Soybean | nucleus | 76.36 | 85.73 |
| Zm00001d015248_P018 | Maize | cytosol, nucleus, plasma membrane | 87.13 | 85.67 |
| KXG31550 | Sorghum | cytosol, nucleus, plasma membrane | 84.88 | 85.08 |
| GSMUA_Achr10P... | Banana | nucleus | 50.08 | 84.33 |
| Os02t0478900-00 | Rice | nucleus | 59.61 | 82.96 |
| PGSC0003DMT400094070 | Potato | mitochondrion | 18.14 | 80.14 |
| KRH11024 | Soybean | nucleus | 63.49 | 79.51 |
| Bra037770.1-P | Field mustard | cytosol, nucleus, plasma membrane | 77.91 | 79.26 |
| AT5G64270.1 | Thale cress | cytosol, nucleus, plasma membrane | 77.91 | 79.2 |
| PGSC0003DMT400023774 | Potato | cytosol | 18.14 | 77.48 |
| Bra024281.1-P | Field mustard | nucleus | 74.26 | 76.95 |
| VIT_19s0015g00400.t01 | Wine grape | cytosol | 4.57 | 75.64 |
| VIT_19s0015g00420.t01 | Wine grape | cytosol | 4.65 | 75.0 |
| CDY43803 | Canola | nucleus | 13.33 | 49.86 |
| CDX84509 | Canola | plastid | 10.0 | 40.44 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:16.4.1.2.4.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0000245 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | InterPro:HEAT_type_2 | InterPro:IPR011989 |
| InterPro:IPR021133 | PFAM:PF08920 | PFscan:PS50077 | PANTHER:PTHR12097 | InterPro:SF3b_su1 | InterPro:SF3b_su1-like |
| SMART:SM01349 | SUPFAM:SSF48371 | InterPro:TOG | EnsemblPlantsGene:TraesCS5B01G017300 | EnsemblPlants:TraesCS5B01G017300.1 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:16033627..16037670
Molecular Weight (calculated)
142130.0 Da
IEP (calculated)
6.455
GRAVY (calculated)
-0.262
Length
1290 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGIDAELAR AQEERRRLEE ALAAGAPMAA SFVTFDKDLY GGGGGFAGYD TSIPASEDDD APEDAEPAAN PAARRLASYT GHAVAAAADV TGSGDDGGPP
0101: SASKPRRIID REDDYRRRRL DRGLSPERHD AFAAGEATPA PSVRTYGDAM REASALQERE RTLREIARKK EGERAKEEKA APQPPPAAST KRRNRWDQSQ
0201: EGDAAAAAGA KKKARTDSDW DAPDATPGIG RWDATPGRVG EATPSVRRNR WDETPTPGRM ADADATPAAG GITPGAGATP SGAWDATPKL PGGLATPTPK
0301: KQRSRWDETP VSMGNATPSG TAATPFGGEN LATPTPGHLA AVPMTPEYYH LLRTERDIEE RNRPLTDEEL DAMFPTQGYK ILEPPASYQP IRTPARKLLA
0401: TPTPLSTPLY AIPEENRGQQ FDVPKDLGPG LPLMKPEDIE FFGKLLNEDD EEQLTPEERK ERKIMKLLLK VKNGTPPQRK ASLKQLTDKA REFGAGPLFN
0501: GILPLLMQPT LEDQERHLLV KVIDRVLYKL DELVRPFVHK ILVVIEPLLI DEDYYARAEG REIISNLSKA AGLATMIAAM RPDIDNIDEY VRNTTARAFS
0601: VVASALGIPA LLPFLKAVCQ SKKSWQARHT GIKIVQQIAI LMGCAVLPHL KNLVEIIEHG LTDENQKVRT ITALSLAALA EAAAPYGIES FDSVLRPLWK
0701: GTRSHSGKVL AAFLKAIGFI IPLMDAEYAS FYTKGVMPVL TREFKSPDEE MKKIVLKVVK QCVSTEGVQA DYIRRQCLIS TECLDPGCIR NHTVLSAFFK
0801: HFWVRRMALD RRNYKQLVET TVEMANKVGV TDIVGKVVED LKDESEPYRR MVMETIEKVV ANLGASDIDP RLEELLIDGI LYAFQEQTSD DANVMLNGFG
0901: AVVNALGQRV KPYLPQICGT IKWRLNNKSA KVRQQAADLI SRIAIVMKQC QEEQLMGHLG VVLYEYLGEE YPEVLGSILG ALKAIVNVIG MTKMTPPIKD
1001: LLPRLTPILK NRHEKVQENC IDLVGRIADR GAEFVPAREW MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA
1101: IAIVAETCSP FTVLPALMNE YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVAPLLED ALMDRDLVHR QTAASAIKHM ALGVAGLGCE DALVHLLNYV
1201: WPNIFETSPH LINAVMEAIE GMRVALGAAV VLNYCLQGLF HPARKVREVY WKIYNSLYIG AQDALVASYP ALGDLGNNDI FSRPELTMFV
0101: SASKPRRIID REDDYRRRRL DRGLSPERHD AFAAGEATPA PSVRTYGDAM REASALQERE RTLREIARKK EGERAKEEKA APQPPPAAST KRRNRWDQSQ
0201: EGDAAAAAGA KKKARTDSDW DAPDATPGIG RWDATPGRVG EATPSVRRNR WDETPTPGRM ADADATPAAG GITPGAGATP SGAWDATPKL PGGLATPTPK
0301: KQRSRWDETP VSMGNATPSG TAATPFGGEN LATPTPGHLA AVPMTPEYYH LLRTERDIEE RNRPLTDEEL DAMFPTQGYK ILEPPASYQP IRTPARKLLA
0401: TPTPLSTPLY AIPEENRGQQ FDVPKDLGPG LPLMKPEDIE FFGKLLNEDD EEQLTPEERK ERKIMKLLLK VKNGTPPQRK ASLKQLTDKA REFGAGPLFN
0501: GILPLLMQPT LEDQERHLLV KVIDRVLYKL DELVRPFVHK ILVVIEPLLI DEDYYARAEG REIISNLSKA AGLATMIAAM RPDIDNIDEY VRNTTARAFS
0601: VVASALGIPA LLPFLKAVCQ SKKSWQARHT GIKIVQQIAI LMGCAVLPHL KNLVEIIEHG LTDENQKVRT ITALSLAALA EAAAPYGIES FDSVLRPLWK
0701: GTRSHSGKVL AAFLKAIGFI IPLMDAEYAS FYTKGVMPVL TREFKSPDEE MKKIVLKVVK QCVSTEGVQA DYIRRQCLIS TECLDPGCIR NHTVLSAFFK
0801: HFWVRRMALD RRNYKQLVET TVEMANKVGV TDIVGKVVED LKDESEPYRR MVMETIEKVV ANLGASDIDP RLEELLIDGI LYAFQEQTSD DANVMLNGFG
0901: AVVNALGQRV KPYLPQICGT IKWRLNNKSA KVRQQAADLI SRIAIVMKQC QEEQLMGHLG VVLYEYLGEE YPEVLGSILG ALKAIVNVIG MTKMTPPIKD
1001: LLPRLTPILK NRHEKVQENC IDLVGRIADR GAEFVPAREW MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA
1101: IAIVAETCSP FTVLPALMNE YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVAPLLED ALMDRDLVHR QTAASAIKHM ALGVAGLGCE DALVHLLNYV
1201: WPNIFETSPH LINAVMEAIE GMRVALGAAV VLNYCLQGLF HPARKVREVY WKIYNSLYIG AQDALVASYP ALGDLGNNDI FSRPELTMFV
0001: MADLDPEIAK TQEERRKMEA DLASLTSLTF DRDLYGGNDR ASYSTSIAPN EEDDANLDTT GSLVAQRLAS YTAPRSILND VARPHNEDDD VGFKPRQSIA
0101: EREGEYRNRR LNRVLSPDRV DAFAMGDKTP DASVRTYTDH MRETALQREK EETMRLIAKK KKEEEEAAAK HQKDSAPPPP ASSSSSSSKR RHRWDLPEED
0201: GAAAKKAKAA SSDWDLPDAA PGIGRWDAPT PGRVSDATPS AGRRNRWDET PTPGRVTDSD ATPGGGVTPG ATPSGVTWDG LATPTPKRQR SRWDETPATM
0301: GSATPMGGVT PGAAYTPGVT PIGGIDMATP TPGQLIFRGP MTPEQLNMQR WEKDIEERNR PLSDEELDAM FPKDGYKVLD PPATYVPIRT PARKLQQTPT
0401: PMATPGYVIP EENRGQQYDV PPEVPGGLPF MKPEDYQYFG SLLNEENEEE LSPEEQKERK IMKLLLKVKN GTPPQRKTAL RQLTDKAREL GAGPLFNKIL
0501: PLLMQPTLED QERHLLVKVI DRILYKLDEM VRPYVHKILV VIEPLLIDED YYARVEGREI ISNLSKAAGL ASMIAAMRPD IDNIDEYVRN TTARAFSVVA
0601: SALGIPALLP FLKAVCQSKR SWQARHTGIK IVQQIAILIG CAVLPHLRSL VEIIEHGLSD ENQKVRTITA LSLAALAEAA APYGIESFDS VLKPLWKGIR
0701: SHRGKVLAAF LKAIGFIIPL MDAIYASYYT KEVMVILIRE FQSPDEEMKK IVLKVVKQCV STEGVEPEYI RSDILPEFFR NFWTRKMALE RRNYKQLVET
0801: TVEVANKVGV ADIVGRVVED LKDESEQYRR MVMETIDKVV TNLGASDIDA RLEELLIDGI LYAFQEQTSD DANVMLNGFG AVVNALGQRV KPYLPQICGT
0901: IKWRLNNKSA KVRQQAADLI SRIAVVMKQC GEEQLMGHLG VVLYEYLGEE YPEVLGSILG ALKAIVNVIG MTKMTPPIKD LLPRLTPILK NRHEKVQENC
1001: IDLVGRIADR GAEFVPAREW MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA IAIVAETCSP FTVLPALMNE
1101: YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVTPLLED ALMDRDLVHR QTAASAVKHM ALGVAGLGCE DALVHLLNFI WPNIFETSPH VINAVMEAIE
1201: GMRVALGAAV ILNYCLQGLF HPARKVREVY WKIYNSLYIG AQDTLVAAYP VLEDEQNNVY SRPELTMFV
0101: EREGEYRNRR LNRVLSPDRV DAFAMGDKTP DASVRTYTDH MRETALQREK EETMRLIAKK KKEEEEAAAK HQKDSAPPPP ASSSSSSSKR RHRWDLPEED
0201: GAAAKKAKAA SSDWDLPDAA PGIGRWDAPT PGRVSDATPS AGRRNRWDET PTPGRVTDSD ATPGGGVTPG ATPSGVTWDG LATPTPKRQR SRWDETPATM
0301: GSATPMGGVT PGAAYTPGVT PIGGIDMATP TPGQLIFRGP MTPEQLNMQR WEKDIEERNR PLSDEELDAM FPKDGYKVLD PPATYVPIRT PARKLQQTPT
0401: PMATPGYVIP EENRGQQYDV PPEVPGGLPF MKPEDYQYFG SLLNEENEEE LSPEEQKERK IMKLLLKVKN GTPPQRKTAL RQLTDKAREL GAGPLFNKIL
0501: PLLMQPTLED QERHLLVKVI DRILYKLDEM VRPYVHKILV VIEPLLIDED YYARVEGREI ISNLSKAAGL ASMIAAMRPD IDNIDEYVRN TTARAFSVVA
0601: SALGIPALLP FLKAVCQSKR SWQARHTGIK IVQQIAILIG CAVLPHLRSL VEIIEHGLSD ENQKVRTITA LSLAALAEAA APYGIESFDS VLKPLWKGIR
0701: SHRGKVLAAF LKAIGFIIPL MDAIYASYYT KEVMVILIRE FQSPDEEMKK IVLKVVKQCV STEGVEPEYI RSDILPEFFR NFWTRKMALE RRNYKQLVET
0801: TVEVANKVGV ADIVGRVVED LKDESEQYRR MVMETIDKVV TNLGASDIDA RLEELLIDGI LYAFQEQTSD DANVMLNGFG AVVNALGQRV KPYLPQICGT
0901: IKWRLNNKSA KVRQQAADLI SRIAVVMKQC GEEQLMGHLG VVLYEYLGEE YPEVLGSILG ALKAIVNVIG MTKMTPPIKD LLPRLTPILK NRHEKVQENC
1001: IDLVGRIADR GAEFVPAREW MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA IAIVAETCSP FTVLPALMNE
1101: YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVTPLLED ALMDRDLVHR QTAASAVKHM ALGVAGLGCE DALVHLLNFI WPNIFETSPH VINAVMEAIE
1201: GMRVALGAAV ILNYCLQGLF HPARKVREVY WKIYNSLYIG AQDTLVAAYP VLEDEQNNVY SRPELTMFV
Arabidopsis Description
Nuclear protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FMF9]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.