Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G022470.3 | Barley | cytosol | 38.42 | 92.17 |
| TraesCS5B01G017300.1 | Wheat | cytosol, nucleus, plasma membrane | 95.11 | 90.39 |
| HORVU6Hr1G065110.1 | Barley | cytosol | 38.01 | 89.79 |
| CDX84510 | Canola | nucleus, peroxisome, plasma membrane | 19.49 | 88.52 |
| Solyc07g041790.1.1 | Tomato | cytosol, nucleus | 5.14 | 86.3 |
| TraesCS6D01G104700.1 | Wheat | nucleus | 89.56 | 85.65 |
| EES04510 | Sorghum | cytosol, nucleus, plasma membrane | 86.79 | 83.12 |
| Zm00001d053882_P001 | Maize | plastid | 86.62 | 82.97 |
| Os02t0478900-00 | Rice | nucleus | 62.48 | 82.63 |
| CDY43804 | Canola | cytosol, peroxisome, plasma membrane | 56.28 | 82.24 |
| KRH21266 | Soybean | nucleus | 75.94 | 81.03 |
| Zm00001d015248_P018 | Maize | cytosol, nucleus, plasma membrane | 86.7 | 81.02 |
| GSMUA_Achr10P... | Banana | nucleus | 50.49 | 80.81 |
| KXG31550 | Sorghum | cytosol, nucleus, plasma membrane | 84.83 | 80.81 |
| Os02t0146400-01 | Rice | cytosol, nucleus | 23.41 | 80.17 |
| KRH11024 | Soybean | nucleus | 67.29 | 80.1 |
| PGSC0003DMT400094070 | Potato | mitochondrion | 18.76 | 78.77 |
| CDX84511 | Canola | cytosol | 34.83 | 77.78 |
| PGSC0003DMT400023774 | Potato | cytosol | 18.84 | 76.49 |
| VIT_19s0015g00400.t01 | Wine grape | cytosol | 4.81 | 75.64 |
| Bra037770.1-P | Field mustard | cytosol, nucleus, plasma membrane | 77.9 | 75.32 |
| VIT_19s0015g00420.t01 | Wine grape | cytosol | 4.89 | 75.0 |
| AT5G64270.1 | Thale cress | cytosol, nucleus, plasma membrane | 77.49 | 74.86 |
| Bra024281.1-P | Field mustard | nucleus | 74.31 | 73.17 |
| CDY43803 | Canola | nucleus | 14.52 | 51.59 |
| CDX84509 | Canola | plastid | 11.09 | 42.63 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:16.4.1.2.4.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0000245 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | InterPro:IPR011989 | PFAM:PF08920 |
| PANTHER:PTHR12097 | InterPro:SF3b_su1 | InterPro:SF3b_su1-like | SMART:SM01349 | SUPFAM:SSF48371 | InterPro:TOG |
| EnsemblPlantsGene:TraesCS5D01G025300 | EnsemblPlants:TraesCS5D01G025300.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:-:22441237..22444917
Molecular Weight (calculated)
135462.0 Da
IEP (calculated)
6.175
GRAVY (calculated)
-0.313
Length
1226 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGIDAELAR AQEERRRLEE ALAAGAPMAV SSVTFDKDLY GGGGGFAGYD TSIPASEDDD DAPEDAPNPA ARRLASYTGH AVAAAGDIPR SADGGDDDGA
0101: PANKPRRIID REDDYRRRRL DRGLSPERHD AFAAGEATPA PSVRTYGDAM REASVLQEKE RTLREIAKKK KKEEEERAKE KKAAPQPPSA ALTKRRNRWD
0201: QSQEGDAAAA AGAEKKAKTD SDWDAPDATP GIGRWDATPG RAGDATPSVR RNRWDETPTP GRMADGDATP AAGGITPGAG ATPSGAWDAT PKLLPGGLAT
0301: PTPKKQRSRW DETPVSMGNA TPSGTAATPF RAENLATPTP GHLAAVQMTP EYYHLLRMER DIEERNRPLT DEELDAMFPP QGYKILEPPA SYQPIRTPAR
0401: KLLATPTPLS TPLYAIPEEN RGQQFDVPKD LGPGLPLMKP EDIQFFGKLL NEDDEEQLTP EEQKERKIMK LLLKVKNGTP PQQKTSLRQL TDKAREFGAG
0501: PLFNGILPLL MQPTLEDQER HLLVKVIDRV LYKLDELVRP FVHKILVVIE PLLIDEDYYA RAEGREIISN LSKAAGLATM IAAMRPDIDN IDEYVRNTTA
0601: RAFSVVASAL GIPALLPFLK AVCQSKKSWQ ARHTGIKIVQ QIAILMGCAV LPHLKNLVEI MEHGLTDENQ KVRTITALSL AALAEAAAPY GIESFDSVLR
0701: PLWKGTRCHS GKVLAAFLKA IGFIIPLMDA EYASFYTKGV MPVLIREFKS PDEEMKKIVL KVVKQCVSTE GVQADYIRSQ CVISTQCLDP DCIRSHRVLS
0801: AFFKHFWVRR MALDRRNYKQ LVETTVEMAN KVGVTDIVGK IVEDLKDESE PYRRMVMETI EKVVANLGTS DIDPRLEELL IDGILYAFQE QTSDDANVML
0901: NGFGAVVNAL GQRVKPYLPQ ICGTIKWRLN NKSAKVRQQA ADLISRIAIV MKQCQEEQLM GHLGVVLYEY LGEEYPEVLG SILGALKAIV NVIGMTKMTP
1001: PIKDLLPRLT PILKNRHEKV QENCIDLVGR IADRGAEFVP AREWMRICFE LLEMLKAHKK GIRRDTVNTF GYIAKAIGPQ DVLATLLNNL KVQERQNRVC
1101: TTVAIAIVAE TCSPFTVLPA LMNEYRVPEL NVQNGVLKSL SFLFEYIGEM GKDYIYAVAP LLEDALMDRD LVHRQTAASA IKHMALGVAG LGCEDALVHL
1201: LNYVWPNIFE TSPHLINAVM EAIEGM
0101: PANKPRRIID REDDYRRRRL DRGLSPERHD AFAAGEATPA PSVRTYGDAM REASVLQEKE RTLREIAKKK KKEEEERAKE KKAAPQPPSA ALTKRRNRWD
0201: QSQEGDAAAA AGAEKKAKTD SDWDAPDATP GIGRWDATPG RAGDATPSVR RNRWDETPTP GRMADGDATP AAGGITPGAG ATPSGAWDAT PKLLPGGLAT
0301: PTPKKQRSRW DETPVSMGNA TPSGTAATPF RAENLATPTP GHLAAVQMTP EYYHLLRMER DIEERNRPLT DEELDAMFPP QGYKILEPPA SYQPIRTPAR
0401: KLLATPTPLS TPLYAIPEEN RGQQFDVPKD LGPGLPLMKP EDIQFFGKLL NEDDEEQLTP EEQKERKIMK LLLKVKNGTP PQQKTSLRQL TDKAREFGAG
0501: PLFNGILPLL MQPTLEDQER HLLVKVIDRV LYKLDELVRP FVHKILVVIE PLLIDEDYYA RAEGREIISN LSKAAGLATM IAAMRPDIDN IDEYVRNTTA
0601: RAFSVVASAL GIPALLPFLK AVCQSKKSWQ ARHTGIKIVQ QIAILMGCAV LPHLKNLVEI MEHGLTDENQ KVRTITALSL AALAEAAAPY GIESFDSVLR
0701: PLWKGTRCHS GKVLAAFLKA IGFIIPLMDA EYASFYTKGV MPVLIREFKS PDEEMKKIVL KVVKQCVSTE GVQADYIRSQ CVISTQCLDP DCIRSHRVLS
0801: AFFKHFWVRR MALDRRNYKQ LVETTVEMAN KVGVTDIVGK IVEDLKDESE PYRRMVMETI EKVVANLGTS DIDPRLEELL IDGILYAFQE QTSDDANVML
0901: NGFGAVVNAL GQRVKPYLPQ ICGTIKWRLN NKSAKVRQQA ADLISRIAIV MKQCQEEQLM GHLGVVLYEY LGEEYPEVLG SILGALKAIV NVIGMTKMTP
1001: PIKDLLPRLT PILKNRHEKV QENCIDLVGR IADRGAEFVP AREWMRICFE LLEMLKAHKK GIRRDTVNTF GYIAKAIGPQ DVLATLLNNL KVQERQNRVC
1101: TTVAIAIVAE TCSPFTVLPA LMNEYRVPEL NVQNGVLKSL SFLFEYIGEM GKDYIYAVAP LLEDALMDRD LVHRQTAASA IKHMALGVAG LGCEDALVHL
1201: LNYVWPNIFE TSPHLINAVM EAIEGM
0001: MADLDPEIAK TQEERRKMEA DLASLTSLTF DRDLYGGNDR ASYSTSIAPN EEDDANLDTT GSLVAQRLAS YTAPRSILND VARPHNEDDD VGFKPRQSIA
0101: EREGEYRNRR LNRVLSPDRV DAFAMGDKTP DASVRTYTDH MRETALQREK EETMRLIAKK KKEEEEAAAK HQKDSAPPPP ASSSSSSSKR RHRWDLPEED
0201: GAAAKKAKAA SSDWDLPDAA PGIGRWDAPT PGRVSDATPS AGRRNRWDET PTPGRVTDSD ATPGGGVTPG ATPSGVTWDG LATPTPKRQR SRWDETPATM
0301: GSATPMGGVT PGAAYTPGVT PIGGIDMATP TPGQLIFRGP MTPEQLNMQR WEKDIEERNR PLSDEELDAM FPKDGYKVLD PPATYVPIRT PARKLQQTPT
0401: PMATPGYVIP EENRGQQYDV PPEVPGGLPF MKPEDYQYFG SLLNEENEEE LSPEEQKERK IMKLLLKVKN GTPPQRKTAL RQLTDKAREL GAGPLFNKIL
0501: PLLMQPTLED QERHLLVKVI DRILYKLDEM VRPYVHKILV VIEPLLIDED YYARVEGREI ISNLSKAAGL ASMIAAMRPD IDNIDEYVRN TTARAFSVVA
0601: SALGIPALLP FLKAVCQSKR SWQARHTGIK IVQQIAILIG CAVLPHLRSL VEIIEHGLSD ENQKVRTITA LSLAALAEAA APYGIESFDS VLKPLWKGIR
0701: SHRGKVLAAF LKAIGFIIPL MDAIYASYYT KEVMVILIRE FQSPDEEMKK IVLKVVKQCV STEGVEPEYI RSDILPEFFR NFWTRKMALE RRNYKQLVET
0801: TVEVANKVGV ADIVGRVVED LKDESEQYRR MVMETIDKVV TNLGASDIDA RLEELLIDGI LYAFQEQTSD DANVMLNGFG AVVNALGQRV KPYLPQICGT
0901: IKWRLNNKSA KVRQQAADLI SRIAVVMKQC GEEQLMGHLG VVLYEYLGEE YPEVLGSILG ALKAIVNVIG MTKMTPPIKD LLPRLTPILK NRHEKVQENC
1001: IDLVGRIADR GAEFVPAREW MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA IAIVAETCSP FTVLPALMNE
1101: YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVTPLLED ALMDRDLVHR QTAASAVKHM ALGVAGLGCE DALVHLLNFI WPNIFETSPH VINAVMEAIE
1201: GMRVALGAAV ILNYCLQGLF HPARKVREVY WKIYNSLYIG AQDTLVAAYP VLEDEQNNVY SRPELTMFV
0101: EREGEYRNRR LNRVLSPDRV DAFAMGDKTP DASVRTYTDH MRETALQREK EETMRLIAKK KKEEEEAAAK HQKDSAPPPP ASSSSSSSKR RHRWDLPEED
0201: GAAAKKAKAA SSDWDLPDAA PGIGRWDAPT PGRVSDATPS AGRRNRWDET PTPGRVTDSD ATPGGGVTPG ATPSGVTWDG LATPTPKRQR SRWDETPATM
0301: GSATPMGGVT PGAAYTPGVT PIGGIDMATP TPGQLIFRGP MTPEQLNMQR WEKDIEERNR PLSDEELDAM FPKDGYKVLD PPATYVPIRT PARKLQQTPT
0401: PMATPGYVIP EENRGQQYDV PPEVPGGLPF MKPEDYQYFG SLLNEENEEE LSPEEQKERK IMKLLLKVKN GTPPQRKTAL RQLTDKAREL GAGPLFNKIL
0501: PLLMQPTLED QERHLLVKVI DRILYKLDEM VRPYVHKILV VIEPLLIDED YYARVEGREI ISNLSKAAGL ASMIAAMRPD IDNIDEYVRN TTARAFSVVA
0601: SALGIPALLP FLKAVCQSKR SWQARHTGIK IVQQIAILIG CAVLPHLRSL VEIIEHGLSD ENQKVRTITA LSLAALAEAA APYGIESFDS VLKPLWKGIR
0701: SHRGKVLAAF LKAIGFIIPL MDAIYASYYT KEVMVILIRE FQSPDEEMKK IVLKVVKQCV STEGVEPEYI RSDILPEFFR NFWTRKMALE RRNYKQLVET
0801: TVEVANKVGV ADIVGRVVED LKDESEQYRR MVMETIDKVV TNLGASDIDA RLEELLIDGI LYAFQEQTSD DANVMLNGFG AVVNALGQRV KPYLPQICGT
0901: IKWRLNNKSA KVRQQAADLI SRIAVVMKQC GEEQLMGHLG VVLYEYLGEE YPEVLGSILG ALKAIVNVIG MTKMTPPIKD LLPRLTPILK NRHEKVQENC
1001: IDLVGRIADR GAEFVPAREW MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA IAIVAETCSP FTVLPALMNE
1101: YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVTPLLED ALMDRDLVHR QTAASAVKHM ALGVAGLGCE DALVHLLNFI WPNIFETSPH VINAVMEAIE
1201: GMRVALGAAV ILNYCLQGLF HPARKVREVY WKIYNSLYIG AQDTLVAAYP VLEDEQNNVY SRPELTMFV
Arabidopsis Description
Nuclear protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FMF9]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.