CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000619.1-P	Field mustard	cytosol	99.82	99.82
CDX83163	Canola	cytosol	99.29	99.29
AT5G50320.1	Thale cress	cytosol	98.58	98.58
Solyc03g110910.2.1	Tomato	cytosol, nucleus	91.86	91.86
PGSC0003DMT400039303	Potato	cytosol	91.5	91.67
KRH63718	Soybean	cytosol, nucleus	91.15	91.31
VIT_17s0000g10190.t01	Wine grape	cytosol	90.8	91.12
KRH54237	Soybean	cytosol, nucleus	90.8	90.96
GSMUA_Achr3P02630_001	Banana	cytosol	79.29	89.96
HORVU4Hr1G039630.1	Barley	cytosol	10.44	89.39
Zm00001d003258_P001	Maize	plastid	88.5	87.72
TraesCS2D01G341600.1	Wheat	cytosol	87.96	87.35
TraesCS2B01G361800.1	Wheat	cytosol	87.96	87.35
Zm00001d025713_P001	Maize	plastid	88.14	87.22
TraesCS2A01G320900.1	Wheat	cytosol	87.79	87.17
EES12405	Sorghum	cytosol	87.96	87.04
Os04t0484900-01	Rice	cytosol	88.14	86.91
HORVU2Hr1G083870.1	Barley	plasma membrane	87.96	81.08

Protein Annotations

MapMan:15.3.6.2.3	Gene3D:3.40.630.30	Gene3D:3.80.30.20	GO:A0A078H9A3	UniProt:A0A078H9A3	InterPro:Acyl_CoA_acyltransferase
EnsemblPlants:CDY34039	ProteinID:CDY34039	ProteinID:CDY34039.1	InterPro:ELP3-like	InterPro:Elp3/MiaB/NifB	InterPro:GNAT_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006464	GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0016746	GO:GO:0019538
GO:GO:0046872	GO:GO:0051536	EnsemblPlantsGene:GSBRNA2T00055909001	InterPro:IPR000182	InterPro:IPR023404	PFAM:PF00583
PFAM:PF04055	PFAM:PF16199	PIRSF:PIRSF005669	PFscan:PS51186	PANTHER:PTHR11135	PANTHER:PTHR11135:SF0
InterPro:Radical_SAM_C	SMART:SM00729	SUPFAM:SSF102114	SUPFAM:SSF55729	TIGRFAMs:TIGR01211	UniParc:UPI0004EC4D94
InterPro:rSAM	InterPro:rSAM_horseshoe	SEG:seg	:	:	:

Description

BnaC03g27760DElongator complex protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A078H9A3]

Coordinates

chrLK032326:+:338019..341282

Molecular Weight (calculated)

63743.0 Da

IEP (calculated)

8.832

GRAVY (calculated)

-0.399

Length

565 amino acids

Sequence
(BLAST)

001: MATAVVMNGE SKKQPRPGRG GFEGRGLTEE EARVRAISEI VSTMIERSHR NENVDLNAIK TQACRKYGLA RAPKLVEMIA ALPDSERETL LPKLRAKPVR
101: TASGIAVVAV MSKPHRCPHI ATTGNICVYC PGGPDSDFEY STQSYTGYEP TSMRAIRARY NPYVQARSRI DQLKRLGHSV DKVEFILMGG TFMSLPAEYR
201: DFFIRNLHDA LSGHTSANVE EAVAYSEHSA TKCIGMTIET RPDYCLGPHL RQMLTYGCTR LEIGVQSTYE DVARDTNRGH TVAAVADCFC LAKDAGFKVV
301: AHMMPDLPNV GVERDMESFK EFFESPSFRA DGLKIYPTLV IRGTGLYELW KTGRYRNYPP EQLVDIVARI LSMVPPWTRV YRVQRDIPMP LVTSGVEKGN
401: LRELALARMD DLGLKCRDVR TREAGIQDIH HKIKPEQVEL VRRDYTANQG WETFLSYEDT RQDILVGLLR LRKCGKNVTC PELMGKCSVV RELHVYGTAV
501: PVHGREADKL QHQGYGTLLM EEAERIARRE HRSNKIGVIS GVGTRHYYRK LGYELEGPYM VKHLL

Best Arabidopsis Sequence Match ( AT5G50320.1 )
(BLAST)

001: MATAVVMNGE LKKQPRPGKG GYQGRGLTEE EARVRAISEI VSTMIERSHR NENVDLNAIK TAACRKYGLA RAPKLVEMIA ALPDSERETL LPKLRAKPVR
101: TASGIAVVAV MSKPHRCPHI ATTGNICVYC PGGPDSDFEY STQSYTGYEP TSMRAIRARY NPYVQARSRI DQLKRLGHSV DKVEFILMGG TFMSLPAEYR
201: DFFIRNLHDA LSGHTSANVE EAVAYSEHSA TKCIGMTIET RPDYCLGPHL RQMLIYGCTR LEIGVQSTYE DVARDTNRGH TVAAVADCFC LAKDAGFKVV
301: AHMMPDLPNV GVERDMESFK EFFESPSFRA DGLKIYPTLV IRGTGLYELW KTGRYRNYPP EQLVDIVARI LSMVPPWTRV YRVQRDIPMP LVTSGVEKGN
401: LRELALARMD DLGLKCRDVR TREAGIQDIH HKIKPEQVEL VRRDYTANEG WETFLSYEDT RQDILVGLLR LRKCGKNVTC PELMGKCSVV RELHVYGTAV
501: PVHGRDADKL QHQGYGTLLM EEAERIARRE HRSNKIGVIS GVGTRHYYRK LGYELEGPYM VKHLL

Arabidopsis Description

HAG3Elongator complex protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.