Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P02630_001 | Banana | cytosol | 90.91 | 12.05 |
| TraesCS2D01G341600.1 | Wheat | cytosol | 95.45 | 11.07 |
| TraesCS2B01G361800.1 | Wheat | cytosol | 95.45 | 11.07 |
| TraesCS2A01G320900.1 | Wheat | cytosol | 95.45 | 11.07 |
| Os04t0484900-01 | Rice | cytosol | 93.94 | 10.82 |
| Zm00001d003258_P001 | Maize | plastid | 92.42 | 10.7 |
| EES12405 | Sorghum | cytosol | 92.42 | 10.68 |
| Zm00001d025713_P001 | Maize | plastid | 90.91 | 10.51 |
| VIT_17s0000g10190.t01 | Wine grape | cytosol | 89.39 | 10.48 |
| KRH63718 | Soybean | cytosol, nucleus | 89.39 | 10.46 |
| KRH54237 | Soybean | cytosol, nucleus | 89.39 | 10.46 |
| CDY34039 | Canola | cytosol | 89.39 | 10.44 |
| CDX83163 | Canola | cytosol | 89.39 | 10.44 |
| Bra000619.1-P | Field mustard | cytosol | 89.39 | 10.44 |
| AT5G50320.1 | Thale cress | cytosol | 89.39 | 10.44 |
| HORVU2Hr1G083870.1 | Barley | plasma membrane | 95.45 | 10.28 |
| PGSC0003DMT400039303 | Potato | cytosol | 86.36 | 10.11 |
| Solyc03g110910.2.1 | Tomato | cytosol, nucleus | 86.36 | 10.09 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G039630.1 | EnsemblPlantsGene:HORVU4Hr1G039630 | InterPro:ELP3-like | InterPro:Radical_SAM_C | PANTHER:PTHR11135 | PANTHER:PTHR11135:SF0 |
| PFAM:PF16199 | UniParc:UPI000B478350 | UniProt:A0A287NUK8 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:303649397..303650467
Molecular Weight (calculated)
7746.4 Da
IEP (calculated)
6.781
GRAVY (calculated)
-0.492
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MMPNLPNVGV ERDMESLREF FENPAFRADG QKIYPTLIRG TGLYELWKTG RYRNYPPELL VDIVAR
001: MATAVVMNGE LKKQPRPGKG GYQGRGLTEE EARVRAISEI VSTMIERSHR NENVDLNAIK TAACRKYGLA RAPKLVEMIA ALPDSERETL LPKLRAKPVR
101: TASGIAVVAV MSKPHRCPHI ATTGNICVYC PGGPDSDFEY STQSYTGYEP TSMRAIRARY NPYVQARSRI DQLKRLGHSV DKVEFILMGG TFMSLPAEYR
201: DFFIRNLHDA LSGHTSANVE EAVAYSEHSA TKCIGMTIET RPDYCLGPHL RQMLIYGCTR LEIGVQSTYE DVARDTNRGH TVAAVADCFC LAKDAGFKVV
301: AHMMPDLPNV GVERDMESFK EFFESPSFRA DGLKIYPTLV IRGTGLYELW KTGRYRNYPP EQLVDIVARI LSMVPPWTRV YRVQRDIPMP LVTSGVEKGN
401: LRELALARMD DLGLKCRDVR TREAGIQDIH HKIKPEQVEL VRRDYTANEG WETFLSYEDT RQDILVGLLR LRKCGKNVTC PELMGKCSVV RELHVYGTAV
501: PVHGRDADKL QHQGYGTLLM EEAERIARRE HRSNKIGVIS GVGTRHYYRK LGYELEGPYM VKHLL
101: TASGIAVVAV MSKPHRCPHI ATTGNICVYC PGGPDSDFEY STQSYTGYEP TSMRAIRARY NPYVQARSRI DQLKRLGHSV DKVEFILMGG TFMSLPAEYR
201: DFFIRNLHDA LSGHTSANVE EAVAYSEHSA TKCIGMTIET RPDYCLGPHL RQMLIYGCTR LEIGVQSTYE DVARDTNRGH TVAAVADCFC LAKDAGFKVV
301: AHMMPDLPNV GVERDMESFK EFFESPSFRA DGLKIYPTLV IRGTGLYELW KTGRYRNYPP EQLVDIVARI LSMVPPWTRV YRVQRDIPMP LVTSGVEKGN
401: LRELALARMD DLGLKCRDVR TREAGIQDIH HKIKPEQVEL VRRDYTANEG WETFLSYEDT RQDILVGLLR LRKCGKNVTC PELMGKCSVV RELHVYGTAV
501: PVHGRDADKL QHQGYGTLLM EEAERIARRE HRSNKIGVIS GVGTRHYYRK LGYELEGPYM VKHLL
Arabidopsis Description
HAG3Elongator complex protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGS1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.