Factsheet for Zm00001d003258_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12405	Sorghum	cytosol	98.07	97.9
Zm00001d025713_P001	Maize	plastid	97.37	97.2
Os04t0484900-01	Rice	cytosol	96.49	95.99
TraesCS2D01G341600.1	Wheat	cytosol	95.79	95.96
TraesCS2B01G361800.1	Wheat	cytosol	95.61	95.78
TraesCS2A01G320900.1	Wheat	cytosol	95.61	95.78
HORVU4Hr1G039630.1	Barley	cytosol	10.7	92.42
GSMUA_Achr3P02630_001	Banana	cytosol	79.82	91.37
VIT_17s0000g10190.t01	Wine grape	cytosol	90.0	91.12
Solyc03g110910.2.1	Tomato	cytosol, nucleus	89.82	90.62
PGSC0003DMT400039303	Potato	cytosol	89.47	90.43
KRH63718	Soybean	cytosol, nucleus	88.95	89.89
HORVU2Hr1G083870.1	Barley	plasma membrane	95.79	89.07
KRH54237	Soybean	cytosol, nucleus	88.07	89.01
AT5G50320.1	Thale cress	cytosol	88.07	88.85
CDY34039	Canola	cytosol	87.72	88.5
Bra000619.1-P	Field mustard	cytosol	87.72	88.5
CDX83163	Canola	cytosol	87.37	88.14

Protein Annotations

EntrezGene:100216833	MapMan:15.3.6.2.3	Gene3D:3.40.630.30	Gene3D:3.80.30.20	InterPro:Acyl_CoA_acyltransferase	UniProt:B4FJY4
EMBL:BT037422	InterPro:ELP3-like	InterPro:Elp3/MiaB/NifB	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004402	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006464
GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0016573	GO:GO:0016740	GO:GO:0016746	GO:GO:0019538	GO:GO:0046872	GO:GO:0051536
InterPro:IPR000182	InterPro:IPR023404	EMBL:KJ728332	ProteinID:ONM16542.1	PFAM:PF00583	PFAM:PF04055
PFAM:PF16199	PIRSF:PIRSF005669	PFscan:PS51186	PANTHER:PTHR11135	PANTHER:PTHR11135:SF0	InterPro:Radical_SAM_C
SMART:SM00729	SUPFAM:SSF102114	SUPFAM:SSF55729	TIGRFAMs:TIGR01211	UniParc:UPI00017B69C6	EnsemblPlantsGene:Zm00001d003258
EnsemblPlants:Zm00001d003258_P001	EnsemblPlants:Zm00001d003258_T001	InterPro:rSAM	InterPro:rSAM_horseshoe	SEG:seg	:

Description

GNAT-transcription factor 11Elongator complex protein 3

Coordinates

chr2:+:38097924..38102928

Molecular Weight (calculated)

63770.1 Da

IEP (calculated)

8.453

GRAVY (calculated)

-0.278

Length

570 amino acids

Sequence
(BLAST)

001: MATAATAMVV PEQPRRRKPA PGRGGVALPA GLSEEEARVR AIAEIVSAMG ELSRRGEDVD LNALKSAACR RYGLARAPKL VEMIAAVPEA DRAALLPRLR
101: AKPVRTASGI AVVAVMSKPH RCPHIATTGN ICVYCPGGPD SDFEYSTQSY TGYEPTSMRA IRARYNPYVQ ARSRIDQLKR LGHSVDKVEF ILMGGTFMSL
201: PADYRDYFIR NLHDALSGHT SANVEEAICY SEHSAVKCIG MTIETRPDYC LGPHLRQMLS YGCTRLEIGV QSTYEDVARD TNRGHTVAAV ADCFCLAKDA
301: GFKVVAHMMP DLPNVGVERD LESFREFFES PAFRADGLKI YPTLVIRGTG LYELWKTGRY RNYPPELLVD IVARILSMVP PWTRVYRVQR DIPMPLVTSG
401: VEKGNLRELA LARMDDLGLK CRDVRTREAG IQDIHHKIRP DEVELVRRDY AANEGWETFL SYEDTRQDIL IGLLRLRKCG RNVTCPELVG RCSIVRELHV
501: YGTAVPVHGR DVDKLQHQGY GTLLMEEAER IAQKEHRSEK LAVISGVGTR HYYRKLGYEL EGPYMVKCLA

Best Arabidopsis Sequence Match ( AT5G50320.1 )
(BLAST)

001: MATAVVMNGE LKKQPRPGKG GYQGRGLTEE EARVRAISEI VSTMIERSHR NENVDLNAIK TAACRKYGLA RAPKLVEMIA ALPDSERETL LPKLRAKPVR
101: TASGIAVVAV MSKPHRCPHI ATTGNICVYC PGGPDSDFEY STQSYTGYEP TSMRAIRARY NPYVQARSRI DQLKRLGHSV DKVEFILMGG TFMSLPAEYR
201: DFFIRNLHDA LSGHTSANVE EAVAYSEHSA TKCIGMTIET RPDYCLGPHL RQMLIYGCTR LEIGVQSTYE DVARDTNRGH TVAAVADCFC LAKDAGFKVV
301: AHMMPDLPNV GVERDMESFK EFFESPSFRA DGLKIYPTLV IRGTGLYELW KTGRYRNYPP EQLVDIVARI LSMVPPWTRV YRVQRDIPMP LVTSGVEKGN
401: LRELALARMD DLGLKCRDVR TREAGIQDIH HKIKPEQVEL VRRDYTANEG WETFLSYEDT RQDILVGLLR LRKCGKNVTC PELMGKCSVV RELHVYGTAV
501: PVHGRDADKL QHQGYGTLLM EEAERIARRE HRSNKIGVIS GVGTRHYYRK LGYELEGPYM VKHLL

Arabidopsis Description

HAG3Elongator complex protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.