Factsheet for TraesCS2D01G341600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G361800.1	Wheat	cytosol	99.82	99.82
TraesCS2A01G320900.1	Wheat	cytosol	99.82	99.82
EES12405	Sorghum	cytosol	96.49	96.15
Os04t0484900-01	Rice	cytosol	96.49	95.81
Zm00001d025713_P001	Maize	plastid	96.13	95.8
Zm00001d003258_P001	Maize	plastid	95.96	95.79
HORVU4Hr1G039630.1	Barley	cytosol	11.07	95.45
HORVU2Hr1G083870.1	Barley	plasma membrane	100.0	92.82
GSMUA_Achr3P02630_001	Banana	cytosol	79.44	90.76
VIT_17s0000g10190.t01	Wine grape	cytosol	89.63	90.59
Solyc03g110910.2.1	Tomato	cytosol, nucleus	89.46	90.09
KRH63718	Soybean	cytosol, nucleus	89.1	89.89
PGSC0003DMT400039303	Potato	cytosol	89.1	89.89
KRH54237	Soybean	cytosol, nucleus	88.4	89.18
AT5G50320.1	Thale cress	cytosol	87.52	88.14
CDY34039	Canola	cytosol	87.35	87.96
Bra000619.1-P	Field mustard	cytosol	87.35	87.96
CDX83163	Canola	cytosol	87.17	87.79

Protein Annotations

MapMan:15.3.6.2.3	Gene3D:3.40.630.30	Gene3D:3.80.30.20	InterPro:Acyl_CoA_acyltransferase	InterPro:ELP3-like	InterPro:Elp3/MiaB/NifB
InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0051536	InterPro:IPR000182
InterPro:IPR023404	PFAM:PF00583	PFAM:PF04055	PFAM:PF16199	PIRSF:PIRSF005669	PFscan:PS51186
PANTHER:PTHR11135	PANTHER:PTHR11135:SF0	InterPro:Radical_SAM_C	SMART:SM00729	SUPFAM:SSF102114	SUPFAM:SSF55729
TIGRFAMs:TIGR01211	EnsemblPlantsGene:TraesCS2D01G341600	EnsemblPlants:TraesCS2D01G341600.1	TIGR:cd01335	InterPro:rSAM	InterPro:rSAM_horseshoe
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:436369139..436372459

Molecular Weight (calculated)

63580.7 Da

IEP (calculated)

8.738

GRAVY (calculated)

-0.312

Length

569 amino acids

Sequence
(BLAST)

001: MAAAVAAAAA DQPRRRKPTP GRGGVVLPAG LSEEEARVRA IAEIVSEMGE LSRRGEDVDL NALKSAACRR YGLARAPKLV EMIAAVPEAD RAALLPRLRA
101: KPVRTASGIA VVAVMSKPHR CPHIATTGNI CVYCPGGPDS DFEYSTQSYT GYEPTSMRAI RARYNPYVQA RSRIDQLKRL GHSADKVEFI LMGGTFMSLP
201: ADYRDYFIRN LHDALSGHTS ANVEEAVCYS EHSAVKCIGM TIETRPDYCL GPHLRQMLSY GCTRLEIGVQ STYEDVARDT NRGHTVAAVA DCFSLAKDAG
301: FKVVAHMMPD LPNVGVERDM ESFREFFENP AFRADGLKIY PTLVIRGTGL YELWKTGRYR NYPPELLVDI VARILSMVPP WTRVYRVQRD IPMPLVTSGV
401: EKGNLRELAL ARMEDLGLKC RDVRTREAGI QDIHHKIRPD EVELVRRDYA ANDGWETFLS YEDTRQDILI GLLRLRKCGR NVTGPELVGR CSIVRELHVY
501: GTAVPVHGRD AEKLQHQGYG TLLMEEAERI ARKEHRSKKL AVISGVGTRH YYRKLGYELE GPYMVKCLA

Best Arabidopsis Sequence Match ( AT5G50320.1 )
(BLAST)

001: MATAVVMNGE LKKQPRPGKG GYQGRGLTEE EARVRAISEI VSTMIERSHR NENVDLNAIK TAACRKYGLA RAPKLVEMIA ALPDSERETL LPKLRAKPVR
101: TASGIAVVAV MSKPHRCPHI ATTGNICVYC PGGPDSDFEY STQSYTGYEP TSMRAIRARY NPYVQARSRI DQLKRLGHSV DKVEFILMGG TFMSLPAEYR
201: DFFIRNLHDA LSGHTSANVE EAVAYSEHSA TKCIGMTIET RPDYCLGPHL RQMLIYGCTR LEIGVQSTYE DVARDTNRGH TVAAVADCFC LAKDAGFKVV
301: AHMMPDLPNV GVERDMESFK EFFESPSFRA DGLKIYPTLV IRGTGLYELW KTGRYRNYPP EQLVDIVARI LSMVPPWTRV YRVQRDIPMP LVTSGVEKGN
401: LRELALARMD DLGLKCRDVR TREAGIQDIH HKIKPEQVEL VRRDYTANEG WETFLSYEDT RQDILVGLLR LRKCGKNVTC PELMGKCSVV RELHVYGTAV
501: PVHGRDADKL QHQGYGTLLM EEAERIARRE HRSNKIGVIS GVGTRHYYRK LGYELEGPYM VKHLL

Arabidopsis Description

HAG3Elongator complex protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.