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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G039630.1 Barley cytosol 12.05 90.91
KRH63718 Soybean cytosol, nucleus 91.37 80.67
VIT_17s0000g10190.t01 Wine grape cytosol 91.16 80.64
Solyc03g110910.2.1 Tomato cytosol, nucleus 91.37 80.53
PGSC0003DMT400039303 Potato cytosol 91.16 80.5
KRH54237 Soybean cytosol, nucleus 90.96 80.32
EES12405 Sorghum cytosol 91.57 79.86
Zm00001d003258_P001 Maize plastid 91.37 79.82
Os04t0484900-01 Rice cytosol 91.77 79.76
AT5G50320.1 Thale cress cytosol 90.36 79.65
Zm00001d025713_P001 Maize plastid 91.16 79.51
TraesCS2B01G361800.1 Wheat cytosol 90.76 79.44
TraesCS2D01G341600.1 Wheat cytosol 90.76 79.44
CDY34039 Canola cytosol 89.96 79.29
Bra000619.1-P Field mustard cytosol 89.96 79.29
TraesCS2A01G320900.1 Wheat cytosol 90.56 79.26
CDX83163 Canola cytosol 89.76 79.11
HORVU2Hr1G083870.1 Barley plasma membrane 90.76 73.74
Protein Annotations
MapMan:15.3.6.2.3Gene3D:3.40.630.30Gene3D:3.80.30.20InterPro:Acyl_CoA_acyltransferaseInterPro:ELP3-likeInterPro:Elp3/MiaB/NifB
InterPro:GNAT_domGO:GO:0002098GO:GO:0003674GO:GO:0003824GO:GO:0004402GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005719GO:GO:0005737
GO:GO:0005829GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006464GO:GO:0007154
GO:GO:0007165GO:GO:0007275GO:GO:0008080GO:GO:0008150GO:GO:0008152GO:GO:0008283
GO:GO:0009058GO:GO:0009294GO:GO:0009653GO:GO:0009719GO:GO:0009987GO:GO:0010928
GO:GO:0016043GO:GO:0016573GO:GO:0016740GO:GO:0016746GO:GO:0019538GO:GO:0033588
GO:GO:0035265GO:GO:0040007GO:GO:0046872GO:GO:0051536GO:GO:0090708GO:GO:2000025
EnsemblPlantsGene:GSMUA_Achr3G02630_001EnsemblPlants:GSMUA_Achr3P02630_001EnsemblPlants:GSMUA_Achr3T02630_001InterPro:IPR000182InterPro:IPR023404UniProt:M0SB81
PFAM:PF00583PFAM:PF04055PFAM:PF16199PIRSF:PIRSF005669PFscan:PS51186PANTHER:PTHR11135
PANTHER:PTHR11135:SF0InterPro:Radical_SAM_CSMART:SM00729SUPFAM:SSF102114SUPFAM:SSF55729TIGRFAMs:TIGR01211
UniParc:UPI00029676A9InterPro:rSAMInterPro:rSAM_horseshoeSEG:seg::
Description
Elongator complex protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr3G02630_001]
Coordinates
chr3:-:1726786..1736919
Molecular Weight (calculated)
56260.5 Da
IEP (calculated)
7.991
GRAVY (calculated)
-0.323
Length
498 amino acids
Sequence
(BLAST)
001: MWGVVAWYDP RDSSSGVLIF FVGSCSSSDP PVRTASGIAV VAVMSKPHRC PHIATTGNIC VYCPGGPDSD FEYSTQSYTG YEPTSMRAIR ARYNPYVQAR
101: SRIDQLKRLG HSVDKVEFIL MGGTFMSLPA DYRDYFIRNL HDALSGHTSA NVEEAVRYSE HGATKCIGMT IETRPDYCLG PHLRQMLSYG CTRLEIGVQS
201: TYEDVARDTN RGHTVAAVAD CFCLAKDAGF KVVAHMMPDL PNVGVERDLE SFKEFFESPA FRADGLKIYP TLVIRGTGLY ELWKTGRYRN YPPELLVDIV
301: ARILSMVPPW TRVYRVQRDI PMPLVTSGVE KGNLRELALA RMEDLGLKCR DVRTREAGIQ DIHHKVKPDE VELVRRDYAA NEGWETFLSY EDTRQDILVG
401: LLRLRKCGRN TTCPELMGRC SIVRELHVYG TAVPVHGRDA DKLQHQGYGT LLMEEAERIA RREHRSTKLA VISGVGTRHY YRKLGYELEG PYMVKYVT
Best Arabidopsis Sequence Match ( AT5G50320.1 )
(BLAST)
001: MATAVVMNGE LKKQPRPGKG GYQGRGLTEE EARVRAISEI VSTMIERSHR NENVDLNAIK TAACRKYGLA RAPKLVEMIA ALPDSERETL LPKLRAKPVR
101: TASGIAVVAV MSKPHRCPHI ATTGNICVYC PGGPDSDFEY STQSYTGYEP TSMRAIRARY NPYVQARSRI DQLKRLGHSV DKVEFILMGG TFMSLPAEYR
201: DFFIRNLHDA LSGHTSANVE EAVAYSEHSA TKCIGMTIET RPDYCLGPHL RQMLIYGCTR LEIGVQSTYE DVARDTNRGH TVAAVADCFC LAKDAGFKVV
301: AHMMPDLPNV GVERDMESFK EFFESPSFRA DGLKIYPTLV IRGTGLYELW KTGRYRNYPP EQLVDIVARI LSMVPPWTRV YRVQRDIPMP LVTSGVEKGN
401: LRELALARMD DLGLKCRDVR TREAGIQDIH HKIKPEQVEL VRRDYTANEG WETFLSYEDT RQDILVGLLR LRKCGKNVTC PELMGKCSVV RELHVYGTAV
501: PVHGRDADKL QHQGYGTLLM EEAERIARRE HRSNKIGVIS GVGTRHYYRK LGYELEGPYM VKHLL
Arabidopsis Description
HAG3Elongator complex protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGS1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.