CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
plastid 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0572200-01	Rice	plasma membrane	52.91	57.31
GSMUA_Achr8P09280_001	Banana	cytosol	6.08	47.92
KXG26428	Sorghum	plasma membrane	44.71	41.63
EER99041	Sorghum	endoplasmic reticulum, plasma membrane	32.8	30.1
EES18560	Sorghum	golgi, plasma membrane	31.22	30.03
EER92732	Sorghum	golgi	24.07	24.73
KRH38505	Soybean	plasma membrane, vacuole	18.25	24.21
OQU85775	Sorghum	golgi, plasma membrane, vacuole	25.93	23.17
KXG39223	Sorghum	golgi, plasma membrane, plastid, vacuole	23.02	22.48
KRH13267	Soybean	plasma membrane	9.52	22.09
OQU92087	Sorghum	golgi, peroxisome, plastid	14.29	21.69
OQU82489	Sorghum	plasma membrane, vacuole	13.23	21.1
OQU76061	Sorghum	cytosol, peroxisome, plasma membrane	28.04	19.45
EER90301	Sorghum	endoplasmic reticulum, golgi, vacuole	16.67	15.67
EES18815	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	17.99	14.38

Protein Annotations

MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	EntrezGene:8068930	UniProt:C5XVL9	EnsemblPlants:EES05293	ProteinID:EES05293
ProteinID:EES05293.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0043161	GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083
PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF414	SMART:SM00184	EnsemblPlantsGene:SORBI_3004G187600
SUPFAM:SSF57850	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0001A85865	RefSeq:XP_002452317.1	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:53967959..53969835

Molecular Weight (calculated)

40824.0 Da

IEP (calculated)

8.880

GRAVY (calculated)

-0.146

Length

378 amino acids

Sequence
(BLAST)

001: MAIPNARRPN PLAALYLLLA VVGAFNTVTA QAQVPPPPQL QLLSETTGRT VPTTVITVAA IVFFVLVLFC VLINQWRRSS SSADADASAG GWQASIRWRR
101: RGLDPAAVAL LPILPYAEIR KHKSGGGVLE CAVCLTAFDD GDELRLLPQC SHAFHPDCID PWLEDHITCP LCRANLERPV MPPPAASLSS PETKPLQTTL
201: EAAGVTVRVV EVENDDERRR EAQEETVDLV KLRARAARMM PRSRSTGQHS ASASASAVAA ETTGDDRERF TVRLPPHVLE EVLKSRRLRH ATSLVIRLGG
301: ASNCEGSSSA CGERCHGARR RWPSLLARTT SWAQSVAEVS ARWGGVGPDA GARKPPCGHV VCSTAARWPA RCKARNLA

Best Arabidopsis Sequence Match ( AT4G40070.1 )
(BLAST)

001: MMTRVECFNP HRWIILHVAI IIQSKANAQS FSPSPPDLQT GHTPSKTTVF AVLVTLFFLT GLLSVYIRHC ARSNPDSSTR YFRNRANDGS SRRGGLDNAV
101: VESFPVFAYS SVKESKIGSK DLECAICLNE LEDHETVRLL PICNHLFHID CIDTWLYSHA TCPVCRSNLT AKSNKPGDED DGVPLAAMRD HVVVDIETVE
201: VAKSHHRRLS SEISGKFPRS NSTGHSMDRF SDGTERFTLR LPDDVKMRLM AVKGRRLKRT RSFDVDLTAE HYCRSGEESS NTIGSGAKSG RVNWPDRWGL
301: TLFVSKSNSG SVRSQKSNGE PLK

Arabidopsis Description

ATL32RING-H2 finger protein ATL32 [Source:UniProtKB/Swiss-Prot;Acc:Q8W571]
SUBAcon: [mitochondrion,golgi,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.