CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037192_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	65.87	85.27
Os06t0218300-01	Rice	endoplasmic reticulum, extracellular, golgi	55.96	69.0
TraesCS7D01G178000.1	Wheat	golgi	47.34	63.24
TraesCS7B01G081700.1	Wheat	golgi	47.89	63.04
TraesCS7A01G176700.1	Wheat	golgi	47.16	61.93
HORVU4Hr1G022090.1	Barley	endoplasmic reticulum, golgi, plasma membrane	22.02	56.6
HORVU4Hr1G080840.1	Barley	cytosol	24.4	56.12
HORVU7Hr1G036380.2	Barley	endoplasmic reticulum	41.28	54.09
OQU85775	Sorghum	golgi, plasma membrane, vacuole	37.98	48.94
EER99041	Sorghum	endoplasmic reticulum, plasma membrane	29.72	39.32
EES18560	Sorghum	golgi, plasma membrane	27.71	38.42
AT4G09100.1	Thale cress	extracellular	8.99	37.12
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	22.75	36.9
KRH33975	Soybean	golgi, plasma membrane, vacuole	23.49	35.65
Bra010641.1-P	Field mustard	extracellular, golgi	19.82	35.06
CDX90377	Canola	extracellular, golgi	19.82	35.06
CDY39477	Canola	extracellular	19.82	34.84
KRH72413	Soybean	cytosol, golgi, vacuole	22.75	33.16
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	22.94	32.98
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	20.18	32.93
CDX82175	Canola	extracellular	14.13	32.91
CDX75097	Canola	extracellular	8.26	32.61
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	20.92	32.57
KRG96857	Soybean	vacuole	22.39	32.53
KXG26428	Sorghum	plasma membrane	24.22	32.51
CDX99986	Canola	plasma membrane	20.73	32.38
Bra036631.1-P	Field mustard	plasma membrane	20.73	32.29
CDY53236	Canola	plasma membrane	20.55	32.28
KRH68588	Soybean	plasma membrane	21.65	32.24
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	20.0	32.06
Bra038386.1-P	Field mustard	extracellular	8.07	31.88
CDY48058	Canola	extracellular	8.07	31.88
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	20.92	30.98
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	23.85	30.95
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	22.57	30.9
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	17.06	30.59
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	17.06	30.59
CDY18787	Canola	plasma membrane	21.65	30.49
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	22.2	30.4
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	17.98	30.34
Bra040642.1-P	Field mustard	plasma membrane	21.28	30.05
CDY25038	Canola	plasma membrane	20.37	30.0
AT3G05200.1	Thale cress	plasma membrane	21.83	29.9
AT1G35330.1	Thale cress	endoplasmic reticulum	17.98	29.88
CDX80653	Canola	plasma membrane	16.51	29.7
CDX86163	Canola	plasma membrane	16.33	29.67
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	21.65	29.65
CDY05577	Canola	plasma membrane	20.73	29.58
Bra020591.1-P	Field mustard	plasma membrane	20.55	29.4
Bra009962.1-P	Field mustard	mitochondrion, plastid	15.41	29.37
CDY70284	Canola	plasma membrane	20.92	29.31
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	19.27	29.25
AT1G72200.1	Thale cress	plasma membrane	21.65	29.21
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	20.55	29.02
CDX84270	Canola	cytosol, plastid, vacuole	16.51	28.75
AT2G34990.2	Thale cress	plasma membrane	17.06	28.7
Bra008016.1-P	Field mustard	plasma membrane	21.1	28.54
CDY03651	Canola	plasma membrane	21.1	28.54
EER92732	Sorghum	golgi	19.27	28.53
AT4G09120.1	Thale cress	plasma membrane	17.98	28.41
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	20.37	28.39
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	20.37	28.24
CDY62007	Canola	golgi, plasma membrane	19.45	28.19
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	16.15	28.11
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	16.15	28.11
EES05293	Sorghum	endoplasmic reticulum, golgi, plastid	19.45	28.04
Bra040855.1-P	Field mustard	golgi, plasma membrane	19.27	27.93
CDY21367	Canola	golgi, plasma membrane	19.27	27.93
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	22.02	27.71
Bra012330.1-P	Field mustard	golgi, plasma membrane	17.43	27.62
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	18.53	27.45
CDY31657	Canola	extracellular, plasma membrane, plastid	18.53	27.45
CDX82176	Canola	extracellular	18.35	27.4
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	18.9	27.25
KRH72412	Soybean	nucleus, plasma membrane, plastid	19.27	27.2
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	16.88	27.14
KRH16794	Soybean	plasma membrane	19.45	27.04
Bra028075.1-P	Field mustard	plasma membrane	17.43	26.91
CDY12022	Canola	plasma membrane	17.43	26.91
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	18.17	26.9
CDX82179	Canola	plasma membrane	17.25	26.78
CDY03116	Canola	plasma membrane	17.25	26.63
CDX90713	Canola	extracellular, golgi, plasma membrane	16.51	26.55
CDY05049	Canola	plasma membrane	14.13	26.37
AT1G22500.1	Thale cress	plasma membrane	18.35	26.25
Solyc12g087860.1.1	Tomato	vacuole	17.8	26.01
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	16.88	25.77
Bra008015.1-P	Field mustard	plasma membrane	18.72	25.76
CDY03652	Canola	plasma membrane	18.72	25.76
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	14.13	25.5
PGSC0003DMT400045807	Potato	plasma membrane	17.61	25.4
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	15.78	24.71
KXG39223	Sorghum	golgi, plasma membrane, plastid, vacuole	17.43	24.55
OQU92087	Sorghum	golgi, peroxisome, plastid	11.19	24.5
CDY70750	Canola	extracellular, mitochondrion, nucleus	12.84	23.1
OQU82489	Sorghum	plasma membrane, vacuole	9.72	22.36
CDY05145	Canola	plasma membrane	11.56	21.21
CDY27787	Canola	extracellular, plasma membrane, vacuole	11.56	20.93
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	8.99	20.59
CDY12527	Canola	extracellular, plasma membrane, vacuole	8.81	20.17
EER90301	Sorghum	endoplasmic reticulum, golgi, vacuole	13.95	18.91
CDY50446	Canola	mitochondrion	6.79	15.48
EES18815	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	13.39	15.43

Protein Annotations

MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	UniProt:A0A1W0VS23	ncoils:Coil	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001841	InterPro:IPR013083	EnsemblPlants:OQU76061	ProteinID:OQU76061	ProteinID:OQU76061.1
PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF281	SMART:SM00184	EnsemblPlantsGene:SORBI_3010G086400
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI0009DC8B9A	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:7431963..7435048

Molecular Weight (calculated)

58527.3 Da

IEP (calculated)

6.239

GRAVY (calculated)

-0.551

Length

545 amino acids

Sequence
(BLAST)

001: MVADAETPVP KAPNPSNLTC DRDCPPPSHQ TPRPHHFRFH HPWPSTSQSP LYYAQPRARA IDFVQETHPA RPPVHHRQMT TTPRHHAASS PPLAVLTLLL
101: LLLLLLDTPA AAQQQSPSRD KDNGGGAVGG GGESMPGQSP SFSAPMIVLL VALIAAFFFI GFFSVYMRRC GRGAPAGPGI PAAALLALSR QEQRDRDQQQ
201: QQQQRGLDPA VVASFPTMRY ADAKELRVGG GKDVALECAV CLSEFEDDEE LRLLPSCSHA FHPDCIGEWL AGHVTCPVCR CNLDPEAETA AAEAATSSSE
301: ATATGEAQQQ RDQMAIDVSH HGAEEEEEEE EEDRKRREEA MELERIGSQR RALRSRSGRP AAPPVPVPRS HSTGHSLATR LDGDLERFTL CLPEHVRREM
401: VAAAGEESLR RTGPRDARGG NGGARSARLG WSDRWPSFIT RTFSSRVPFW SASSRRAPDL AEAAVAAGTT GGATTARTRR EKTGGAASDG GSVTPAKGSV
501: RFDCLGGVAP GVTGARVGAA AGDSETEEDV DEDDEEKAIA RQRQA

Best Arabidopsis Sequence Match ( AT4G40070.1 )
(BLAST)

001: MMTRVECFNP HRWIILHVAI IIQSKANAQS FSPSPPDLQT GHTPSKTTVF AVLVTLFFLT GLLSVYIRHC ARSNPDSSTR YFRNRANDGS SRRGGLDNAV
101: VESFPVFAYS SVKESKIGSK DLECAICLNE LEDHETVRLL PICNHLFHID CIDTWLYSHA TCPVCRSNLT AKSNKPGDED DGVPLAAMRD HVVVDIETVE
201: VAKSHHRRLS SEISGKFPRS NSTGHSMDRF SDGTERFTLR LPDDVKMRLM AVKGRRLKRT RSFDVDLTAE HYCRSGEESS NTIGSGAKSG RVNWPDRWGL
301: TLFVSKSNSG SVRSQKSNGE PLK

Arabidopsis Description

ATL32RING-H2 finger protein ATL32 [Source:UniProtKB/Swiss-Prot;Acc:Q8W571]
SUBAcon: [mitochondrion,golgi,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.