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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:golgi
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 91.51 46.63
TraesCS7D01G178000.1 Wheat golgi 84.91 44.12
TraesCS7B01G081700.1 Wheat golgi 85.38 43.72
TraesCS7A01G176700.1 Wheat golgi 83.96 42.89
HORVU3Hr1G007990.1 Barley cytosol 16.98 40.45
AT4G09100.1 Thale cress extracellular 24.06 38.64
HORVU4Hr1G080840.1 Barley cytosol 37.26 33.33
HORVU6Hr1G051510.1 Barley nucleus 13.68 33.33
CDX75097 Canola extracellular 19.34 29.71
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 58.02 29.22
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 60.85 29.19
Bra038386.1-P Field mustard extracellular 18.87 28.99
CDY48058 Canola extracellular 18.87 28.99
HORVU5Hr1G086510.1 Barley mitochondrion 11.79 28.41
CDX82175 Canola extracellular 30.66 27.78
HORVU1Hr1G001970.1 Barley mitochondrion 10.85 25.56
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 56.6 22.02
HORVU6Hr1G077610.1 Barley plasma membrane 41.51 21.67
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 33.02 20.83
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 28.77 20.07
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 28.77 20.07
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 35.38 19.79
KRH72413 Soybean cytosol, golgi, vacuole 34.91 19.79
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 31.13 19.76
HORVU4Hr1G078260.1 Barley plasma membrane 32.55 19.33
Bra010641.1-P Field mustard extracellular, golgi 27.83 19.16
CDX90377 Canola extracellular, golgi 27.83 19.16
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 30.66 19.12
HORVU5Hr1G069980.1 Barley plasma membrane 34.43 19.01
KRH33975 Soybean golgi, plasma membrane, vacuole 32.08 18.94
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 35.85 18.81
HORVU7Hr1G121570.1 Barley endoplasmic reticulum 22.17 18.58
CDX80653 Canola plasma membrane 26.42 18.48
CDY53236 Canola plasma membrane 30.19 18.44
CDY39477 Canola extracellular 26.89 18.39
CDX86163 Canola plasma membrane 25.94 18.33
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 31.6 18.21
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 29.72 18.0
KRG96857 Soybean vacuole 31.6 17.87
Bra009962.1-P Field mustard mitochondrion, plastid 24.06 17.83
HORVU3Hr1G098880.1 Barley plasma membrane 28.77 17.78
CDX99986 Canola plasma membrane 29.25 17.77
CDY70284 Canola plasma membrane 32.55 17.74
Bra036631.1-P Field mustard plasma membrane 29.25 17.71
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 26.42 17.34
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 32.55 17.34
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 32.55 17.34
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 29.25 17.27
CDX84270 Canola cytosol, plastid, vacuole 25.47 17.25
KRH68588 Soybean plasma membrane 29.72 17.21
AT1G72200.1 Thale cress plasma membrane 32.55 17.08
CDY25038 Canola plasma membrane 29.72 17.03
Bra005375.1-P Field mustard cytosol, nucleus, plastid 25.0 16.93
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 25.0 16.93
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 24.06 16.89
Bra008016.1-P Field mustard plasma membrane 32.08 16.87
CDY03651 Canola plasma membrane 32.08 16.87
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 30.66 16.84
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 31.6 16.83
Bra020591.1-P Field mustard plasma membrane 30.19 16.8
CDY18787 Canola plasma membrane 30.66 16.8
CDY05577 Canola plasma membrane 30.19 16.75
Bra040642.1-P Field mustard plasma membrane 30.19 16.58
AT1G35330.1 Thale cress endoplasmic reticulum 25.47 16.46
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 32.55 16.43
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 29.25 16.4
AT2G34990.2 Thale cress plasma membrane 25.0 16.36
AT3G05200.1 Thale cress plasma membrane 30.66 16.33
CDY31657 Canola extracellular, plasma membrane, plastid 28.3 16.3
HORVU4Hr1G057610.1 Barley plastid 31.6 16.26
Bra040855.1-P Field mustard golgi, plasma membrane 28.77 16.22
CDY21367 Canola golgi, plasma membrane 28.77 16.22
CDX82176 Canola extracellular 27.83 16.16
Bra008015.1-P Field mustard plasma membrane 30.19 16.16
CDY03652 Canola plasma membrane 30.19 16.16
CDY05049 Canola plasma membrane 22.17 16.1
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 27.83 16.03
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 27.83 16.03
CDY62007 Canola golgi, plasma membrane 28.3 15.96
CDX82179 Canola plasma membrane 26.42 15.95
PGSC0003DMT400045807 Potato plasma membrane 28.3 15.87
Solyc12g087860.1.1 Tomato vacuole 27.83 15.82
HORVU5Hr1G106000.1 Barley golgi 25.47 15.74
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 28.77 15.6
Bra012330.1-P Field mustard golgi, plasma membrane 25.0 15.41
AT4G09120.1 Thale cress plasma membrane 25.0 15.36
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 28.3 15.27
AT1G22500.1 Thale cress plasma membrane 27.36 15.22
CDY03116 Canola plasma membrane 25.0 15.01
Bra028075.1-P Field mustard plasma membrane 24.53 14.73
CDY12022 Canola plasma membrane 24.53 14.73
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 24.53 14.57
PGSC0003DMT400073575 Potato extracellular, plasma membrane 29.72 14.55
KRH72412 Soybean nucleus, plasma membrane, plastid 26.42 14.51
KRH16794 Soybean plasma membrane 25.94 14.03
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 21.7 13.57
CDX90713 Canola extracellular, golgi, plasma membrane 21.7 13.57
HORVU7Hr1G098470.1 Barley plastid 24.06 12.75
HORVU7Hr1G096980.1 Barley extracellular, vacuole 11.79 12.08
HORVU1Hr1G095220.1 Barley golgi, plasma membrane 21.7 11.68
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 17.92 10.92
HORVU4Hr1G004070.1 Barley cytosol 11.32 9.88
CDY27787 Canola extracellular, plasma membrane, vacuole 10.85 7.64
CDY70750 Canola extracellular, mitochondrion, nucleus 10.85 7.59
CDY05145 Canola plasma membrane 10.38 7.41
CDY12527 Canola extracellular, plasma membrane, vacuole 7.08 6.3
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 7.08 6.3
CDY50446 Canola mitochondrion 2.36 2.09
Protein Annotations
EnsemblPlants:HORVU4Hr1G022090.1EnsemblPlantsGene:HORVU4Hr1G022090Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155PANTHER:PTHR14155:SF281
PFAM:PF13639PFscan:PS50089SEG:segSignalP:SignalP-TMSMART:SM00184SUPFAM:SSF57850
TMHMM:TMhelixUniParc:UPI000B476EEEUniProt:A0A287NIK5MapMan:19.2.2.1.5.3.3::
Description
No Description!
Coordinates
chrchr4H:+:116732758..116734002
Molecular Weight (calculated)
22831.2 Da
IEP (calculated)
4.791
GRAVY (calculated)
0.022
Length
212 amino acids
Sequence
(BLAST)
001: MAIPTPPSCR HAVLLAALLL AAGAVARADD DEWDRTSDGR RGVVYGARKP PSFSAPMVVL LVALIATFFF IGFFSIYIRQ CGRGNSPTIP AAAFLVLSRQ
101: EQQLQARPRG LDPEVVASFP AMTYAEARAL REKEAGDKGE DGTAVLECVV CLSEFEDGDQ LRLLPNCSHT FHPDCIREWL AGHVTCPVCR CSLAPEEPAA
201: TAAAEADDTG RE
Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)
001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
Arabidopsis Description
ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.