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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • plastid 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21367 Canola golgi, plasma membrane 100.0 100.0
Bra012330.1-P Field mustard golgi, plasma membrane 72.34 79.07
AT1G22500.1 Thale cress plasma membrane 78.72 77.69
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 64.1 67.13
Bra008016.1-P Field mustard plasma membrane 65.16 60.79
Bra008015.1-P Field mustard plasma membrane 55.59 52.78
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 32.71 36.83
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 32.71 36.18
KRH72413 Soybean cytosol, golgi, vacuole 35.11 35.29
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 34.84 34.56
Bra038386.1-P Field mustard extracellular 12.5 34.06
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 35.9 33.92
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 33.78 32.48
Bra036631.1-P Field mustard plasma membrane 30.05 32.29
Bra010641.1-P Field mustard extracellular, golgi 26.06 31.82
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 32.98 31.55
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 25.53 31.48
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 30.59 31.25
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.0 30.92
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 28.19 30.72
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 31.65 30.67
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 27.39 30.38
PGSC0003DMT400045807 Potato plasma membrane 30.32 30.16
Solyc12g087860.1.1 Tomato vacuole 29.79 30.03
GSMUA_Achr6P30500_001 Banana plasma membrane 22.87 29.45
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 30.59 29.34
Bra040642.1-P Field mustard plasma membrane 30.05 29.27
Os09t0468300-00 Rice golgi, plasma membrane 30.05 29.2
GSMUA_Achr3P20400_001 Banana mitochondrion 26.6 29.07
GSMUA_AchrUn_... Banana golgi, plasma membrane 27.13 28.9
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 16.22 28.77
KRH72412 Soybean nucleus, plasma membrane, plastid 29.52 28.76
TraesCS5A01G248100.1 Wheat plasma membrane 30.32 28.72
Bra009962.1-P Field mustard mitochondrion, plastid 21.81 28.67
HORVU5Hr1G069980.1 Barley plasma membrane 29.26 28.65
Zm00001d005936_P001 Maize plasma membrane 29.79 28.5
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 27.13 28.49
Bra020591.1-P Field mustard plasma membrane 28.72 28.35
TraesCS5B01G245800.1 Wheat plasma membrane 29.79 28.28
GSMUA_Achr10P... Banana plasma membrane 28.99 28.09
KRH16794 Soybean plasma membrane 28.99 27.81
Bra005375.1-P Field mustard cytosol, nucleus, plastid 23.14 27.8
Zm00001d020789_P001 Maize plasma membrane 29.26 27.64
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 10.37 27.46
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 27.66 26.94
EER99041 Sorghum endoplasmic reticulum, plasma membrane 29.52 26.94
Bra028075.1-P Field mustard plasma membrane 25.27 26.91
GSMUA_AchrUn_... Banana plastid 25.53 26.67
TraesCS3B01G549900.1 Wheat vacuole 22.34 26.67
TraesCS3D01G495500.1 Wheat vacuole 27.13 26.42
HORVU4Hr1G078260.1 Barley plasma membrane 24.47 25.77
HORVU4Hr1G080840.1 Barley cytosol 16.22 25.74
Zm00001d031261_P001 Maize golgi 25.8 25.73
EES18560 Sorghum golgi, plasma membrane 26.86 25.7
Zm00001d027983_P001 Maize plasma membrane, plastid 24.73 25.69
EER92732 Sorghum golgi 25.0 25.54
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 27.13 25.25
Os03t0188200-01 Rice golgi 23.67 25.21
TraesCS4A01G404600.1 Wheat plasma membrane 23.67 25.07
TraesCS4D01G302600.1 Wheat plasma membrane 23.67 25.07
TraesCS6D01G113000.1 Wheat golgi 26.6 24.94
TraesCS4B01G304400.1 Wheat plasma membrane 23.4 24.79
Os08t0484200-01 Rice golgi 27.13 24.7
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 26.6 24.63
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 26.06 24.26
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 27.13 24.23
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.53 23.88
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 26.33 23.86
Zm00001d048230_P001 Maize golgi 23.94 23.68
Zm00001d018122_P001 Maize vacuole 26.33 23.63
Bra013268.1-P Field mustard plasma membrane 18.35 23.47
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.27 23.46
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 27.13 23.34
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.0 23.21
OQU85775 Sorghum golgi, plasma membrane, vacuole 26.06 23.17
Bra025008.1-P Field mustard plastid 17.55 23.0
HORVU6Hr1G077610.1 Barley plasma membrane 24.73 22.91
Zm00001d029395_P001 Maize plasma membrane, plastid 23.14 22.72
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 16.76 22.42
TraesCS7D01G178000.1 Wheat golgi 23.94 22.06
TraesCS7B01G081700.1 Wheat golgi 24.2 21.98
TraesCS7A01G176700.1 Wheat golgi 23.94 21.69
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 25.27 21.49
TraesCS4A01G104900.1 Wheat mitochondrion 22.07 21.45
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 21.54 20.93
Os03t0391100-00 Rice endoplasmic reticulum, golgi 23.94 20.69
HORVU4Hr1G057610.1 Barley plastid 22.61 20.63
TraesCS4D01G200100.1 Wheat plastid 22.34 20.29
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 21.81 19.52
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 21.54 19.42
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 27.93 19.27
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 21.01 18.81
TraesCS4B01G199100.1 Wheat plastid 22.34 18.79
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 17.29 18.68
Bra005343.1-P Field mustard plastid 13.83 18.64
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 19.95 18.03
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 18.62 17.33
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 13.83 15.48
Bra012630.1-P Field mustard nucleus 17.82 10.82
Protein Annotations
EnsemblPlants:Bra040855.1EnsemblPlants:Bra040855.1-PEnsemblPlantsGene:Bra040855Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089SEG:segSignalP:SignalP-TMSMART:SM00184
SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI000253E9C6UniProt:M4FIC6MapMan:19.2.2.1.5.3.3:
Description
AT1G22500 (E=2e-163) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrScaffold000282:-:11336..12466
Molecular Weight (calculated)
41967.9 Da
IEP (calculated)
8.135
GRAVY (calculated)
-0.297
Length
376 amino acids
Sequence
(BLAST)
001: MVMSRLYFYS SFLLLLRFVA AQSSSYEQGT GFNPTTAIVM IVLVSVFFSL GCVSVYMRRC LEQALGIDDG RSGDPGNWLN VRQQTPRGLD ASVIETFPTF
101: RYSTVKTLRI GKEALECPVC LNEFEDDETL RLLPQCCHVF HPGCIDAWLR SHATCPLCRA NLVPVPGESV SFEISGLARE SGQSSPLTSI VDDNRRMALA
201: SPDERLLDSV AWTGNQSMPR KSMSTGWKLA GLFSRSSSYS QTEENLDRFT LRLPQEIHDQ LMNQGSKGHI ALPQVRSSIR GYRTGTLGTE SNYFYFERFD
301: QDGRFDRRPF SITPPYRTGL IRSPNGVING GDGYQERAGT PKSLLLAIRS PFDRLFTGKN NVGERSYLRS GDASPV
Best Arabidopsis Sequence Match ( AT1G22500.1 )
(BLAST)
001: MVVMSRVSFY SSFLLLLLEV VVASSEFDDE GRTSFSPTTA IIMIVLVSVF FALGCISVYM RRCLQHALGM DSGGGPGNWL NVRQTTEPGL DASVIETFPT
101: FPYSTVKTLR IGKEALECPV CLNEFEDDET LRLIPQCCHV FHPGCIDAWL RSQTTCPLCR ANLVPVPGES VSSEIPGLAR ETGQNSLRTP IDDNRKRVLT
201: SPDERLIDSV AWTGNQSMPR KSMSTGWKLA ELYSPASSPG QPEENLDRYT LRLPQEIHDQ LVNSSLGKQG SKGQLALPQE RSSVRGFRTG SLGTEKNYFY
301: FERFDQDGRL DRRPFSITPP YHTRSIQSPD EIINASGNYQ DRAGAPKGLL LAIRSPFDRL FTGKKNAGER SYLQSGDASP V
Arabidopsis Description
ATL15E3 ubiquitin-protein ligase ATL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK92]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.