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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:peroxisome
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G404600.1 Wheat plasma membrane 95.49 95.49
TraesCS4B01G304400.1 Wheat plasma membrane 95.21 95.21
HORVU4Hr1G078260.1 Barley plasma membrane 91.83 91.32
Os03t0188200-01 Rice golgi 67.61 67.99
EER92732 Sorghum golgi 62.54 60.33
Zm00001d027983_P001 Maize plasma membrane, plastid 58.59 57.46
Zm00001d048230_P001 Maize golgi 60.56 56.58
AT4G09100.1 Thale cress extracellular 12.39 33.33
GSMUA_Achr3P20400_001 Banana mitochondrion 30.7 31.69
CDX75097 Canola extracellular 11.83 30.43
GSMUA_AchrUn_... Banana golgi, plasma membrane 29.58 29.75
Bra038386.1-P Field mustard extracellular 11.55 29.71
CDY48058 Canola extracellular 11.55 29.71
CDY53236 Canola plasma membrane 28.45 29.11
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 32.11 29.08
CDX82175 Canola extracellular 18.87 28.63
Bra010641.1-P Field mustard extracellular, golgi 24.79 28.57
CDX90377 Canola extracellular, golgi 24.79 28.57
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 27.04 28.57
KRH33975 Soybean golgi, plasma membrane, vacuole 28.17 27.86
CDY39477 Canola extracellular 24.23 27.74
KRG96857 Soybean vacuole 29.3 27.73
KRH68588 Soybean plasma membrane 28.17 27.32
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 23.38 27.3
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 23.38 27.3
TraesCS6D01G113000.1 Wheat golgi 30.42 26.93
TraesCS2D01G315800.1 Wheat golgi 28.17 26.81
CDY18787 Canola plasma membrane 29.01 26.61
TraesCS3D01G495500.1 Wheat vacuole 28.73 26.42
Bra040642.1-P Field mustard plasma membrane 28.45 26.17
CDX99986 Canola plasma membrane 25.63 26.07
CDX86163 Canola plasma membrane 21.97 26.0
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 25.63 26.0
CDY25038 Canola plasma membrane 27.04 25.95
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 26.76 25.82
CDX80653 Canola plasma membrane 21.97 25.74
Bra036631.1-P Field mustard plasma membrane 25.35 25.71
AT3G05200.1 Thale cress plasma membrane 28.73 25.63
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 28.73 25.63
TraesCS3D01G050600.1 Wheat plasma membrane 25.07 25.5
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 23.94 25.45
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 28.45 25.38
Bra009962.1-P Field mustard mitochondrion, plastid 20.28 25.17
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 22.82 25.08
CDY05577 Canola plasma membrane 26.76 24.87
KRH72413 Soybean cytosol, golgi, vacuole 26.2 24.87
TraesCS5D01G446700.1 Wheat golgi 23.66 24.85
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 24.79 24.51
Bra020591.1-P Field mustard plasma membrane 26.2 24.41
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 26.48 24.35
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 25.07 24.18
CDY31657 Canola extracellular, plasma membrane, plastid 25.07 24.18
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 23.1 24.12
CDX82176 Canola extracellular 24.79 24.11
TraesCS7D01G178000.1 Wheat golgi 27.61 24.02
PGSC0003DMT400073575 Potato extracellular, plasma membrane 29.3 24.02
TraesCS3D01G452500.1 Wheat golgi, plasma membrane, vacuole 23.38 23.99
CDY70284 Canola plasma membrane 26.2 23.91
Bra012330.1-P Field mustard golgi, plasma membrane 23.1 23.84
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 25.35 23.81
Bra040855.1-P Field mustard golgi, plasma membrane 25.07 23.67
CDY21367 Canola golgi, plasma membrane 25.07 23.67
CDX82179 Canola plasma membrane 23.38 23.65
Bra005375.1-P Field mustard cytosol, nucleus, plastid 20.85 23.64
CDX84270 Canola cytosol, plastid, vacuole 20.85 23.64
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 20.85 23.64
AT1G72200.1 Thale cress plasma membrane 26.76 23.51
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 25.07 23.48
CDY62007 Canola golgi, plasma membrane 24.79 23.4
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 24.23 23.37
CDY05049 Canola plasma membrane 19.15 23.29
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.48 23.21
TraesCS7D01G537300.1 Wheat golgi, nucleus, plasma membrane 13.8 23.0
TraesCS4D01G200100.1 Wheat plastid 26.48 22.71
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 26.76 22.62
AT4G09120.1 Thale cress plasma membrane 21.97 22.61
Bra008016.1-P Field mustard plasma membrane 25.63 22.58
CDY03651 Canola plasma membrane 25.63 22.58
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 19.15 22.52
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 22.54 22.41
TraesCS2D01G501500.1 Wheat plastid 12.39 22.34
AT1G22500.1 Thale cress plasma membrane 23.94 22.31
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 24.79 22.11
Bra008015.1-P Field mustard plasma membrane 24.51 21.97
CDY03652 Canola plasma membrane 24.51 21.97
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 23.94 21.63
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 20.56 21.53
CDX90713 Canola extracellular, golgi, plasma membrane 20.56 21.53
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 23.66 21.48
Solyc12g087860.1.1 Tomato vacuole 22.54 21.45
PGSC0003DMT400045807 Potato plasma membrane 22.82 21.43
AT2G34990.2 Thale cress plasma membrane 19.44 21.3
TraesCS7D01G538000.1 Wheat golgi 14.93 20.7
KRH72412 Soybean nucleus, plasma membrane, plastid 22.25 20.47
KRH16794 Soybean plasma membrane 22.25 20.15
AT1G35330.1 Thale cress endoplasmic reticulum 18.59 20.12
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 19.72 20.11
CDY12022 Canola plasma membrane 19.15 19.26
Bra028075.1-P Field mustard plasma membrane 18.59 18.7
CDY03116 Canola plasma membrane 18.31 18.41
CDY70750 Canola extracellular, mitochondrion, nucleus 15.21 17.82
CDY12527 Canola extracellular, plasma membrane, vacuole 10.7 15.97
CDY27787 Canola extracellular, plasma membrane, vacuole 13.24 15.61
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 10.42 15.55
CDY05145 Canola plasma membrane 12.96 15.49
TraesCS7D01G420000.1 Wheat plastid 17.46 15.46
TraesCS1D01G453000.1 Wheat extracellular, plasma membrane 16.9 13.82
CDY50446 Canola mitochondrion 8.17 12.13
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10GO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538
InterPro:IPR001841InterPro:IPR013083PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF298
SMART:SM00184SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixEnsemblPlantsGene:TraesCS4D01G302600EnsemblPlants:TraesCS4D01G302600.1
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDTIGR:cd16454SEG:seg::
Description
No Description!
Coordinates
chr4D:-:470261246..470262717
Molecular Weight (calculated)
38671.5 Da
IEP (calculated)
6.087
GRAVY (calculated)
-0.332
Length
355 amino acids
Sequence
(BLAST)
001: MARGQITQPL LFLLLLSTAL PSLAQQSNST GHTRSSRTAG GFSPTTVVVL VVLIAAFVVL TLFSIYINRC TGGHPVPRRP YRSTVPDQPV DAAAQSDRCR
101: PRGIDRGVVE AFPTAVYGDV KAHMATTKSG PLECAVCLTE FEDCDELRVL PACCHVFHPE CIDPWLAGAV TCPLCRADLT EPPAIPAGAE SRGYLTETAV
201: QEEPEELDEE CSVVSFTAES LTSFSTVWRH EFTGAEYNHY RRTQSAMDAP DRHTLRLPEH VMKELAAVRR HRRAASLAAE YPDTADQRTP GWLTSFLRSM
301: SWQRQSRGDS DAGEEHGGSK RIHPVSGAPV ERPSGSGSGG DEKKESSDVD ALNRV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.