Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 5
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH68588 | Soybean | plasma membrane | 88.8 | 90.98 |
KRH33975 | Soybean | golgi, plasma membrane, vacuole | 62.93 | 65.74 |
KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 58.4 | 65.18 |
VIT_14s0128g00120.t01 | Wine grape | plasma membrane, plastid, vacuole | 53.6 | 47.86 |
CDY53236 | Canola | plasma membrane | 39.73 | 42.94 |
PGSC0003DMT400046825 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 43.2 | 40.7 |
Solyc03g112340.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 42.93 | 40.45 |
CDY18787 | Canola | plasma membrane | 41.33 | 40.05 |
CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 37.33 | 40.0 |
AT3G05200.1 | Thale cress | plasma membrane | 42.4 | 39.95 |
PGSC0003DMT400073575 | Potato | extracellular, plasma membrane | 45.87 | 39.72 |
Bra040642.1-P | Field mustard | plasma membrane | 40.8 | 39.64 |
Bra036631.1-P | Field mustard | plasma membrane | 36.8 | 39.43 |
Os09t0468300-00 | Rice | golgi, plasma membrane | 40.53 | 39.28 |
CDX99986 | Canola | plasma membrane | 36.27 | 38.97 |
Bra039454.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 40.0 | 38.86 |
AT5G27420.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 38.13 | 38.86 |
KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 34.13 | 38.32 |
GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 36.53 | 38.27 |
TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 40.0 | 38.27 |
Zm00001d005936_P001 | Maize | plasma membrane | 40.0 | 38.17 |
HORVU5Hr1G069980.1 | Barley | plasma membrane | 38.93 | 38.02 |
TraesCS5A01G248100.1 | Wheat | plasma membrane | 40.0 | 37.78 |
KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 33.87 | 37.35 |
TraesCS5B01G245800.1 | Wheat | plasma membrane | 39.2 | 37.12 |
GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 34.13 | 37.1 |
GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 30.13 | 37.05 |
CDY25038 | Canola | plasma membrane | 36.53 | 37.03 |
Zm00001d020789_P001 | Maize | plasma membrane | 39.2 | 36.93 |
EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 40.53 | 36.89 |
CDY05577 | Canola | plasma membrane | 37.33 | 36.65 |
KRH72413 | Soybean | cytosol, golgi, vacuole | 36.53 | 36.63 |
GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 34.4 | 36.54 |
Bra020591.1-P | Field mustard | plasma membrane | 37.07 | 36.48 |
Bra009960.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 29.07 | 35.86 |
CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.07 | 35.86 |
GSMUA_Achr3P20400_001 | Banana | mitochondrion | 32.8 | 35.76 |
CDX80653 | Canola | plasma membrane | 28.8 | 35.64 |
KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 36.0 | 35.62 |
TraesCS3D01G495500.1 | Wheat | vacuole | 36.53 | 35.49 |
CDX86163 | Canola | plasma membrane | 28.27 | 35.33 |
TraesCS3B01G549900.1 | Wheat | vacuole | 29.6 | 35.24 |
GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 36.27 | 35.05 |
Bra009962.1-P | Field mustard | mitochondrion, plastid | 26.67 | 34.97 |
TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 37.07 | 34.41 |
TraesCS6D01G113000.1 | Wheat | golgi | 36.27 | 33.92 |
Bra001139.1-P | Field mustard | extracellular, golgi, plasma membrane | 31.47 | 33.91 |
GSMUA_Achr6P30500_001 | Banana | plasma membrane | 26.4 | 33.9 |
HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 36.27 | 33.66 |
TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 36.0 | 33.25 |
GSMUA_Achr10P... | Banana | plasma membrane | 34.4 | 33.25 |
CDY05145 | Canola | plasma membrane | 25.87 | 32.66 |
GSMUA_AchrUn_... | Banana | plastid | 31.2 | 32.5 |
EES18560 | Sorghum | golgi, plasma membrane | 33.6 | 32.06 |
CDY27787 | Canola | extracellular, plasma membrane, vacuole | 25.6 | 31.89 |
Zm00001d031261_P001 | Maize | golgi | 32.0 | 31.83 |
HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 17.87 | 31.6 |
KRH72412 | Soybean | nucleus, plasma membrane, plastid | 32.27 | 31.35 |
KRH09080 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 28.8 | 31.12 |
HORVU4Hr1G080840.1 | Barley | cytosol | 19.47 | 30.8 |
Os08t0484200-01 | Rice | golgi | 33.6 | 30.51 |
KRH53320 | Soybean | mitochondrion | 8.53 | 30.19 |
Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 33.07 | 29.88 |
KRH16794 | Soybean | plasma membrane | 30.93 | 29.59 |
KRH38504 | Soybean | plasma membrane | 28.53 | 29.56 |
KRH38505 | Soybean | plasma membrane, vacuole | 22.4 | 29.47 |
HORVU4Hr1G078260.1 | Barley | plasma membrane | 28.0 | 29.41 |
CDY70750 | Canola | extracellular, mitochondrion, nucleus | 23.73 | 29.37 |
Zm00001d018122_P001 | Maize | vacuole | 32.8 | 29.36 |
TraesCS4D01G302600.1 | Wheat | plasma membrane | 27.73 | 29.3 |
OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 32.8 | 29.08 |
Os03t0188200-01 | Rice | golgi | 27.2 | 28.9 |
Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 32.27 | 28.74 |
TraesCS4A01G404600.1 | Wheat | plasma membrane | 27.2 | 28.73 |
TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.67 | 28.61 |
TraesCS4B01G304400.1 | Wheat | plasma membrane | 26.93 | 28.45 |
TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.67 | 28.4 |
Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 33.07 | 28.38 |
TraesCS7D01G178000.1 | Wheat | golgi | 30.67 | 28.19 |
HORVU6Hr1G077610.1 | Barley | plasma membrane | 30.4 | 28.08 |
EER92732 | Sorghum | golgi | 27.47 | 27.99 |
Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 32.53 | 27.6 |
TraesCS7B01G081700.1 | Wheat | golgi | 30.4 | 27.54 |
TraesCS7A01G176700.1 | Wheat | golgi | 30.4 | 27.47 |
TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 29.6 | 27.41 |
KRH75596 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 22.13 | 26.95 |
Zm00001d027983_P001 | Maize | plasma membrane, plastid | 25.6 | 26.52 |
TraesCS4A01G104900.1 | Wheat | mitochondrion | 26.93 | 26.1 |
Zm00001d048230_P001 | Maize | golgi | 26.13 | 25.79 |
HORVU4Hr1G057610.1 | Barley | plastid | 28.0 | 25.49 |
KRH74402 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 19.47 | 25.35 |
TraesCS4D01G200100.1 | Wheat | plastid | 27.73 | 25.12 |
Zm00001d029395_P001 | Maize | plasma membrane, plastid | 25.07 | 24.54 |
KRH14610 | Soybean | endoplasmic reticulum, nucleus, plastid | 11.47 | 24.43 |
KRH62061 | Soybean | plastid | 17.33 | 23.99 |
KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 24.53 | 23.77 |
KRH45424 | Soybean | endoplasmic reticulum, plasma membrane | 19.47 | 23.62 |
KRH31340 | Soybean | endoplasmic reticulum, plasma membrane | 14.13 | 23.56 |
TraesCS4B01G199100.1 | Wheat | plastid | 28.0 | 23.49 |
KRH16846 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 9.87 | 23.42 |
KRH13267 | Soybean | plasma membrane | 10.13 | 23.31 |
Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 26.4 | 22.76 |
OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 32.53 | 22.39 |
HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 24.53 | 22.12 |
KRH16295 | Soybean | plasma membrane | 23.2 | 22.03 |
KRH39345 | Soybean | endoplasmic reticulum, vacuole | 23.2 | 20.76 |
KRH76331 | Soybean | endoplasmic reticulum | 23.2 | 20.42 |
KRH70712 | Soybean | endoplasmic reticulum, extracellular, vacuole | 11.47 | 20.19 |
KRH52730 | Soybean | golgi, plasma membrane, vacuole | 21.87 | 20.0 |
KRH62179 | Soybean | plasma membrane | 15.47 | 17.26 |
Protein Annotations
EntrezGene:100781706 | MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EMBL:ACUP02012167 | EnsemblPlantsGene:GLYMA_19G236800 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
GO:GO:0043161 | GO:GO:0061630 | UniProt:I1NC10 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRG96857 |
ProteinID:KRG96857 | ProteinID:KRG96857.1 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF263 |
SMART:SM00184 | SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0001876538 | InterPro:Znf_RING |
InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:48579752..48581298
Molecular Weight (calculated)
41297.3 Da
IEP (calculated)
8.415
GRAVY (calculated)
-0.223
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKHIHIALF LLLVSPLIPI AVAQAQSQPN DFSDANLNQF SPSIAIIIVI LVAALFLMAF FSIYVRHCAD SPSTTVSPLT TARSRRAARG LDPAVIQTFP
101: ILEYSEVKIH KIGKEALECA VCLCEFEDTE TLRLIPKCDH VFHPECIDEW LGSHTTCPVC RANLVPTDSE DAIANGNANG VVPVPETFTR DIEAQNDAVE
201: AAPEQQNAEA DPVLPEPEVV SLDKTLNRNR TRGSRSNRPR RFPRSHSTGH SLVQPGENTD RFTLRLPLEV RKQLINRQLQ RASSLIVLPR EGSLRQGYRT
301: GGEGSSRGKI SRRLDRSLKS DRWIFSMAAP FFARALSIRS PRVRNNDVEG TASSSSSSTA PILPPTAVDS ARPLV
101: ILEYSEVKIH KIGKEALECA VCLCEFEDTE TLRLIPKCDH VFHPECIDEW LGSHTTCPVC RANLVPTDSE DAIANGNANG VVPVPETFTR DIEAQNDAVE
201: AAPEQQNAEA DPVLPEPEVV SLDKTLNRNR TRGSRSNRPR RFPRSHSTGH SLVQPGENTD RFTLRLPLEV RKQLINRQLQ RASSLIVLPR EGSLRQGYRT
301: GGEGSSRGKI SRRLDRSLKS DRWIFSMAAP FFARALSIRS PRVRNNDVEG TASSSSSSTA PILPPTAVDS ARPLV
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.