Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86163 | Canola | plasma membrane | 88.12 | 89.0 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 78.55 | 78.29 |
| CDX99986 | Canola | plasma membrane | 65.68 | 57.02 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 65.68 | 56.86 |
| CDY25038 | Canola | plasma membrane | 64.69 | 52.97 |
| CDY05577 | Canola | plasma membrane | 64.03 | 50.79 |
| CDY53236 | Canola | plasma membrane | 50.83 | 44.38 |
| CDY18787 | Canola | plasma membrane | 54.13 | 42.38 |
| CDX75097 | Canola | extracellular | 15.51 | 34.06 |
| CDY48058 | Canola | extracellular | 15.51 | 34.06 |
| CDX82175 | Canola | extracellular | 26.07 | 33.76 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 31.02 | 32.19 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 32.01 | 32.01 |
| CDY05145 | Canola | plasma membrane | 31.35 | 31.99 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 31.68 | 31.89 |
| KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 33.66 | 30.36 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 30.03 | 29.84 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 33.66 | 29.57 |
| KRH33975 | Soybean | golgi, plasma membrane, vacuole | 34.98 | 29.53 |
| CDY31686 | Canola | nucleus | 10.23 | 29.52 |
| CDY05049 | Canola | plasma membrane | 28.05 | 29.11 |
| KRG96857 | Soybean | vacuole | 35.64 | 28.8 |
| CDX90377 | Canola | extracellular, golgi | 29.04 | 28.57 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 33.33 | 28.21 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 31.35 | 28.02 |
| CDY39477 | Canola | extracellular | 28.38 | 27.74 |
| Zm00001d005936_P001 | Maize | plasma membrane | 35.97 | 27.74 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 35.31 | 27.65 |
| KRH68588 | Soybean | plasma membrane | 33.33 | 27.6 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 32.01 | 27.48 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 12.87 | 27.46 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 34.65 | 26.79 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 36.3 | 26.7 |
| Zm00001d020789_P001 | Maize | plasma membrane | 34.98 | 26.63 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 18.48 | 26.42 |
| CDX82179 | Canola | plasma membrane | 30.36 | 26.21 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 27.06 | 26.2 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 34.32 | 26.2 |
| CDX82176 | Canola | extracellular | 31.35 | 26.03 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 33.99 | 26.01 |
| VIT_14s0128g00120.t01 | Wine grape | plasma membrane, plastid, vacuole | 35.97 | 25.95 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 26.73 | 25.88 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 29.37 | 25.87 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 32.67 | 25.78 |
| CDY03116 | Canola | plasma membrane | 30.03 | 25.78 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 32.67 | 25.65 |
| GSMUA_AchrUn_... | Banana | plastid | 30.36 | 25.56 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 31.02 | 25.54 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 31.02 | 25.54 |
| GSMUA_Achr10P... | Banana | plasma membrane | 32.67 | 25.52 |
| CDY12022 | Canola | plasma membrane | 29.7 | 25.5 |
| CDY70284 | Canola | plasma membrane | 32.67 | 25.45 |
| CDY03202 | Canola | plasma membrane | 23.43 | 25.27 |
| CDY03651 | Canola | plasma membrane | 33.33 | 25.06 |
| CDY35174 | Canola | plasma membrane | 23.1 | 24.91 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 31.68 | 24.74 |
| CDY03652 | Canola | plasma membrane | 32.01 | 24.49 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 18.81 | 24.05 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 22.77 | 24.04 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 22.77 | 24.04 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 32.01 | 24.01 |
| Os08t0484200-01 | Rice | golgi | 32.67 | 23.97 |
| CDY21367 | Canola | golgi, plasma membrane | 29.7 | 23.94 |
| CDY62007 | Canola | golgi, plasma membrane | 29.7 | 23.94 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 32.01 | 23.89 |
| TraesCS6D01G113000.1 | Wheat | golgi | 31.35 | 23.69 |
| CDY01502 | Canola | plasma membrane | 23.1 | 23.57 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 24.42 | 23.49 |
| CDX78812 | Canola | plasma membrane | 22.77 | 23.47 |
| CDY44502 | Canola | plasma membrane | 22.77 | 23.47 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 31.02 | 23.27 |
| EES18560 | Sorghum | golgi, plasma membrane | 29.37 | 22.65 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 26.07 | 22.25 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 26.07 | 22.13 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 25.74 | 21.97 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 25.74 | 21.97 |
| CDY05713 | Canola | extracellular | 10.56 | 21.77 |
| Zm00001d031261_P001 | Maize | golgi | 27.06 | 21.75 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 27.72 | 21.71 |
| Os03t0188200-01 | Rice | golgi | 25.08 | 21.53 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 29.7 | 21.38 |
| TraesCS4D01G200100.1 | Wheat | plastid | 28.71 | 21.01 |
| HORVU4Hr1G057610.1 | Barley | plastid | 28.05 | 20.63 |
| Zm00001d018122_P001 | Maize | vacuole | 28.38 | 20.53 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 27.39 | 20.49 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 28.05 | 20.48 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 29.37 | 20.37 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 29.7 | 20.36 |
| EER92732 | Sorghum | golgi | 24.42 | 20.11 |
| TraesCS7B01G081700.1 | Wheat | golgi | 27.39 | 20.05 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.4 | 19.9 |
| TraesCS7D01G178000.1 | Wheat | golgi | 26.73 | 19.85 |
| TraesCS7A01G176700.1 | Wheat | golgi | 27.06 | 19.76 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 27.39 | 19.62 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 24.75 | 19.58 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 28.05 | 19.54 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.07 | 19.51 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 24.75 | 19.38 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 23.1 | 19.34 |
| CDY62419 | Canola | cytosol | 9.57 | 19.33 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 25.74 | 19.21 |
| Zm00001d048230_P001 | Maize | golgi | 24.09 | 19.21 |
| TraesCS4B01G199100.1 | Wheat | plastid | 27.72 | 18.79 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 23.43 | 17.07 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 19.47 | 16.71 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 29.7 | 16.51 |
| CDX70126 | Canola | plasma membrane | 21.12 | 15.88 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 12.21 | 15.55 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 20.79 | 15.44 |
| CDY13888 | Canola | plasma membrane | 18.81 | 15.41 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 20.79 | 15.4 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 18.81 | 15.36 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 19.14 | 15.14 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 11.88 | 15.13 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 20.46 | 14.87 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 20.46 | 14.87 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 20.13 | 14.52 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 19.8 | 14.46 |
| CDY50446 | Canola | mitochondrion | 9.24 | 11.72 |
| CDX90435 | Canola | nucleus | 23.1 | 11.4 |
| CDY05714 | Canola | cytosol | 5.28 | 7.51 |
| CDY31685 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX80653 | EnsemblPlantsGene:GSBRNA2T00133793001 | Gene3D:3.30.40.10 | GO:A0A078CZX6 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF263 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX80653 | ProteinID:CDX80653.1 | SEG:seg | SignalP:SignalP-TM | SMART:SM00184 | SUPFAM:SSF57850 |
| TMHMM:TMhelix | UniParc:UPI0004EC4193 | MapMan:19.2.2.1.5.3.3 | : | : | : |
Description
BnaC07g27910D
Coordinates
chrLK031821:-:1870064..1870975
Molecular Weight (calculated)
33507.5 Da
IEP (calculated)
7.696
GRAVY (calculated)
-0.075
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSFLPLTRK QNALPALVLF LLLSVSELAS SQPAQHSHRL ALTINLVIFC VIAILLILAF LSDCIRRCNE AVNGSVDPSV GGARGETNAT VARGIDASMI
101: DTFPTFVYLE VKTQKIGNGA LECAICLNEF GDDETLRLLP KCDHVFHAHC IGAWLQGHVT CPVCRTNLAY SQQQMAEPVE PEVITETDIE SQQTVNPEPA
201: VEQGENVARV KFSRSHTTGH SVVLPGECAD RFTLRLPDDL RNKLMASGKM TRSKSLLILP RSTGKPVDRS LDRWDQWLFI KTPPFMWRSR DDGSIRRGRG
301: ASI
101: DTFPTFVYLE VKTQKIGNGA LECAICLNEF GDDETLRLLP KCDHVFHAHC IGAWLQGHVT CPVCRTNLAY SQQQMAEPVE PEVITETDIE SQQTVNPEPA
201: VEQGENVARV KFSRSHTTGH SVVLPGECAD RFTLRLPDDL RNKLMASGKM TRSKSLLILP RSTGKPVDRS LDRWDQWLFI KTPPFMWRSR DDGSIRRGRG
301: ASI
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.