Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G200100.1 | Wheat | plastid | 96.64 | 90.34 |
| HORVU4Hr1G057610.1 | Barley | plastid | 93.02 | 87.38 |
| TraesCS4B01G199100.1 | Wheat | plastid | 95.09 | 82.33 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 62.79 | 62.79 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 59.69 | 60.31 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 58.4 | 51.95 |
| AT4G09100.1 | Thale cress | extracellular | 13.7 | 40.15 |
| CDX75097 | Canola | extracellular | 12.4 | 34.78 |
| Bra038386.1-P | Field mustard | extracellular | 12.14 | 34.06 |
| CDY48058 | Canola | extracellular | 12.14 | 34.06 |
| GSMUA_AchrUn_... | Banana | plastid | 31.01 | 33.33 |
| Bra010641.1-P | Field mustard | extracellular, golgi | 24.03 | 30.19 |
| CDX90377 | Canola | extracellular, golgi | 24.03 | 30.19 |
| CDY53236 | Canola | plasma membrane | 26.61 | 29.68 |
| CDY39477 | Canola | extracellular | 23.77 | 29.68 |
| KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 25.58 | 29.46 |
| CDX82175 | Canola | extracellular | 17.31 | 28.63 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.84 | 28.57 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 29.2 | 28.46 |
| TraesCS2A01G501100.1 | Wheat | plastid | 14.47 | 28.43 |
| KRH33975 | Soybean | golgi, plasma membrane, vacuole | 26.36 | 28.41 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 29.72 | 28.33 |
| Bra009960.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 22.22 | 28.29 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.22 | 28.29 |
| Bra036631.1-P | Field mustard | plasma membrane | 25.58 | 28.29 |
| CDX99986 | Canola | plasma membrane | 25.06 | 27.79 |
| CDX80653 | Canola | plasma membrane | 21.71 | 27.72 |
| KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 26.87 | 27.44 |
| CDX86163 | Canola | plasma membrane | 21.19 | 27.33 |
| KRH72413 | Soybean | cytosol, golgi, vacuole | 26.36 | 27.27 |
| AT5G27420.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 25.84 | 27.17 |
| KRG96857 | Soybean | vacuole | 26.1 | 26.93 |
| KRH68588 | Soybean | plasma membrane | 25.32 | 26.78 |
| KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 23.51 | 26.76 |
| CDY25038 | Canola | plasma membrane | 25.58 | 26.76 |
| CDY05049 | Canola | plasma membrane | 20.16 | 26.71 |
| CDY18787 | Canola | plasma membrane | 26.61 | 26.61 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 24.29 | 26.48 |
| Bra040642.1-P | Field mustard | plasma membrane | 26.36 | 26.42 |
| TraesCS3A01G051000.1 | Wheat | vacuole | 22.48 | 26.28 |
| Bra009962.1-P | Field mustard | mitochondrion, plastid | 19.38 | 26.22 |
| CDY05577 | Canola | plasma membrane | 25.84 | 26.18 |
| KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 22.48 | 26.05 |
| AT4G40070.1 | Thale cress | extracellular, golgi, mitochondrion, plastid | 21.71 | 26.01 |
| PGSC0003DMT400046825 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 26.61 | 25.88 |
| Solyc03g112340.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 26.61 | 25.88 |
| AT3G05200.1 | Thale cress | plasma membrane | 26.36 | 25.63 |
| TraesCS2A01G318200.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 25.06 | 25.53 |
| Bra020591.1-P | Field mustard | plasma membrane | 25.06 | 25.46 |
| TraesCS3A01G459700.1 | Wheat | vacuole | 22.22 | 25.15 |
| AT2G35000.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.55 | 25.13 |
| VIT_14s0128g00120.t01 | Wine grape | plasma membrane, plastid, vacuole | 27.13 | 25.0 |
| Bra003887.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 23.0 | 24.79 |
| TraesCS1A01G192600.1 | Wheat | plastid | 13.44 | 24.64 |
| AT4G09110.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 19.12 | 24.5 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 23.26 | 24.46 |
| VIT_18s0001g06670.t01 | Wine grape | extracellular, plasma membrane, vacuole | 25.06 | 24.37 |
| PGSC0003DMT400005472 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 24.55 | 24.3 |
| Bra005375.1-P | Field mustard | cytosol, nucleus, plastid | 19.64 | 24.28 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 19.64 | 24.28 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 19.64 | 24.28 |
| Bra005374.1-P | Field mustard | plasma membrane, plastid, vacuole | 23.0 | 24.18 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 23.0 | 24.18 |
| Bra039454.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 24.03 | 24.09 |
| AT1G35330.1 | Thale cress | endoplasmic reticulum | 20.41 | 24.09 |
| Solyc04g074820.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 24.29 | 23.92 |
| PGSC0003DMT400073575 | Potato | extracellular, plasma membrane | 26.61 | 23.79 |
| TraesCS7A01G176700.1 | Wheat | golgi | 25.32 | 23.61 |
| AT4G09120.1 | Thale cress | plasma membrane | 20.93 | 23.48 |
| Bra000673.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 20.41 | 23.3 |
| CDX82176 | Canola | extracellular | 21.96 | 23.29 |
| AT1G72200.1 | Thale cress | plasma membrane | 24.29 | 23.27 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 20.16 | 23.01 |
| CDY70284 | Canola | plasma membrane | 23.0 | 22.88 |
| Bra008016.1-P | Field mustard | plasma membrane | 23.51 | 22.58 |
| CDY03651 | Canola | plasma membrane | 23.51 | 22.58 |
| AT2G34990.2 | Thale cress | plasma membrane | 18.86 | 22.53 |
| TraesCS7A01G551400.1 | Wheat | golgi, plastid | 13.95 | 22.13 |
| Bra040855.1-P | Field mustard | golgi, plasma membrane | 21.45 | 22.07 |
| CDY21367 | Canola | golgi, plasma membrane | 21.45 | 22.07 |
| CDY62007 | Canola | golgi, plasma membrane | 21.45 | 22.07 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 23.0 | 21.98 |
| CDX82179 | Canola | plasma membrane | 19.9 | 21.94 |
| AT4G09130.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 19.9 | 21.57 |
| Bra012330.1-P | Field mustard | golgi, plasma membrane | 19.12 | 21.51 |
| AT1G22500.1 | Thale cress | plasma membrane | 20.93 | 21.26 |
| CDY03116 | Canola | plasma membrane | 19.12 | 20.96 |
| CDY12022 | Canola | plasma membrane | 19.12 | 20.96 |
| Bra008015.1-P | Field mustard | plasma membrane | 21.45 | 20.96 |
| CDY03652 | Canola | plasma membrane | 21.45 | 20.96 |
| KRH16794 | Soybean | plasma membrane | 20.93 | 20.66 |
| KRH72412 | Soybean | nucleus, plasma membrane, plastid | 20.41 | 20.47 |
| Bra028075.1-P | Field mustard | plasma membrane | 18.6 | 20.4 |
| PGSC0003DMT400045807 | Potato | plasma membrane | 19.9 | 20.37 |
| Solyc12g087860.1.1 | Tomato | vacuole | 19.38 | 20.11 |
| Bra001139.1-P | Field mustard | extracellular, golgi, plasma membrane | 17.83 | 19.83 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 13.44 | 17.16 |
| TraesCS1A01G444900.1 | Wheat | golgi, plasma membrane | 17.31 | 17.05 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 11.89 | 15.28 |
| CDY05145 | Canola | plasma membrane | 11.63 | 15.15 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 8.01 | 13.03 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 7.75 | 12.61 |
| CDY50446 | Canola | mitochondrion | 7.75 | 12.55 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G104900.1 | EnsemblPlantsGene:TraesCS4A01G104900 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF322 | PFAM:PF13639 | PFscan:PS50089 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00184 | SUPFAM:SSF57850 | TIGR:cd16461 | TMHMM:TMhelix |
| MapMan:19.2.2.1.5.3.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:118957421..118958665
Molecular Weight (calculated)
40427.3 Da
IEP (calculated)
9.235
GRAVY (calculated)
0.191
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSPPRTAC IHRHRPFFRL LVLVLAGIRP ASSQFIFTPP TAGATFAWAS TPPPPPPPAA GGLGSGTFNV ATSILFVGVI VALFLVGFFS AYLRRCADAA
101: TGARRGGAAA NANAAVAAAA AAAFSSAVSR SRRRPGLDVA AVEALPVLTY ARARAVKAGR GALECAVCLA EFADDGEKLR LLPGCCHVFH AACIDVWLAA
201: HVTCPVCRAD LADPAVAAAG HVLAADLAAQ QAETAEERVD RFTLRLPERL RREIEDAKRL RRAMSAVTTA AAASTSSGRW VPSALRTMSA ARPSGRWSAL
301: FRALSGPHRN ELGGSSRRVA PVQTHAASGD AVEVVVVQDD AGQEEKYYAH SLTFAGFVID GDVAAGDWNP EVFQIFSAVP VAATSQR
101: TGARRGGAAA NANAAVAAAA AAAFSSAVSR SRRRPGLDVA AVEALPVLTY ARARAVKAGR GALECAVCLA EFADDGEKLR LLPGCCHVFH AACIDVWLAA
201: HVTCPVCRAD LADPAVAAAG HVLAADLAAQ QAETAEERVD RFTLRLPERL RREIEDAKRL RRAMSAVTTA AAASTSSGRW VPSALRTMSA ARPSGRWSAL
301: FRALSGPHRN ELGGSSRRVA PVQTHAASGD AVEVVVVQDD AGQEEKYYAH SLTFAGFVID GDVAAGDWNP EVFQIFSAVP VAATSQR
001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
Arabidopsis Description
ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.