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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 98.72 98.72
AT2G34990.2 Thale cress plasma membrane 36.42 35.19
Bra038386.1-P Field mustard extracellular 13.74 31.16
Bra010641.1-P Field mustard extracellular, golgi 27.8 28.25
GSMUA_Achr6P30500_001 Banana plasma membrane 24.92 26.71
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 31.31 26.63
Bra009962.1-P Field mustard mitochondrion, plastid 24.28 26.57
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.56 26.32
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 11.82 26.06
HORVU4Hr1G080840.1 Barley cytosol 19.49 25.74
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 28.11 25.51
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 29.07 25.35
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 24.6 25.25
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 27.16 25.07
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 16.93 25.0
Bra040642.1-P Field mustard plasma membrane 30.35 24.61
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 30.35 24.61
EER99041 Sorghum endoplasmic reticulum, plasma membrane 32.27 24.51
GSMUA_AchrUn_... Banana plastid 28.11 24.44
Zm00001d020789_P001 Maize plasma membrane 30.99 24.37
GSMUA_AchrUn_... Banana golgi, plasma membrane 27.48 24.36
Bra036631.1-P Field mustard plasma membrane 27.16 24.29
HORVU5Hr1G069980.1 Barley plasma membrane 29.71 24.22
Zm00001d005936_P001 Maize plasma membrane 30.35 24.17
Bra013268.1-P Field mustard plasma membrane 22.68 24.15
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 30.03 23.98
EES18560 Sorghum golgi, plasma membrane 30.03 23.92
Os09t0468300-00 Rice golgi, plasma membrane 29.39 23.77
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 27.16 23.74
Zm00001d031261_P001 Maize golgi 28.43 23.61
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 30.35 23.51
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 29.07 23.45
GSMUA_Achr3P20400_001 Banana mitochondrion 25.56 23.26
TraesCS5B01G245800.1 Wheat plasma membrane 29.39 23.23
TraesCS6D01G113000.1 Wheat golgi 29.71 23.19
TraesCS5A01G248100.1 Wheat plasma membrane 29.39 23.17
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 30.03 23.15
Bra040855.1-P Field mustard golgi, plasma membrane 27.8 23.14
Bra025008.1-P Field mustard plastid 21.09 23.0
Bra028075.1-P Field mustard plasma membrane 25.88 22.95
Bra012330.1-P Field mustard golgi, plasma membrane 24.92 22.67
Bra008016.1-P Field mustard plasma membrane 29.07 22.58
TraesCS3B01G549900.1 Wheat vacuole 22.68 22.54
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 29.07 22.52
TraesCS3D01G495500.1 Wheat vacuole 27.48 22.28
Os08t0484200-01 Rice golgi 29.07 22.03
Os03t0188200-01 Rice golgi 24.6 21.81
EER92732 Sorghum golgi 25.56 21.74
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 29.07 21.62
HORVU4Hr1G078260.1 Barley plasma membrane 24.6 21.57
Bra020591.1-P Field mustard plasma membrane 26.2 21.52
Bra008015.1-P Field mustard plasma membrane 27.16 21.46
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.48 21.39
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 19.17 21.35
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 30.03 21.27
TraesCS4B01G304400.1 Wheat plasma membrane 23.96 21.13
TraesCS7B01G081700.1 Wheat golgi 27.8 21.01
Zm00001d027983_P001 Maize plasma membrane, plastid 24.28 20.99
TraesCS4D01G302600.1 Wheat plasma membrane 23.64 20.85
TraesCS7D01G178000.1 Wheat golgi 27.16 20.83
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.84 20.74
TraesCS7A01G176700.1 Wheat golgi 27.48 20.72
TraesCS4A01G404600.1 Wheat plasma membrane 23.32 20.56
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.52 20.49
HORVU6Hr1G077610.1 Barley plasma membrane 26.52 20.44
GSMUA_Achr10P... Banana plasma membrane 25.24 20.36
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 26.52 20.0
Zm00001d048230_P001 Maize golgi 24.28 20.0
TraesCS4A01G104900.1 Wheat mitochondrion 24.28 19.64
OQU85775 Sorghum golgi, plasma membrane, vacuole 26.2 19.39
Zm00001d018122_P001 Maize vacuole 25.88 19.33
HORVU4Hr1G057610.1 Barley plastid 25.24 19.17
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 21.09 18.97
TraesCS4D01G200100.1 Wheat plastid 24.6 18.6
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 25.88 18.54
Zm00001d029395_P001 Maize plasma membrane, plastid 22.36 18.28
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 22.36 18.09
Bra005343.1-P Field mustard plastid 15.97 17.92
TraesCS4B01G199100.1 Wheat plastid 24.6 17.23
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 21.73 16.35
Os03t0391100-00 Rice endoplasmic reticulum, golgi 22.68 16.32
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 28.11 16.15
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 21.09 15.83
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 21.09 15.71
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 20.45 15.24
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 19.17 14.85
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 15.34 14.29
Bra012630.1-P Field mustard nucleus 22.68 11.47
Protein Annotations
EnsemblPlants:Bra005375.1EnsemblPlants:Bra005375.1-PEnsemblPlantsGene:Bra005375Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089SEG:segSMART:SM00184SUPFAM:SSF57850
TMHMM:TMhelixUniParc:UPI0002547F2AUniProt:M4CMD7MapMan:19.2.2.1.5.3.3::
Description
AT2G34990 (E=4e-071) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA05:+:5096091..5097032
Molecular Weight (calculated)
35445.1 Da
IEP (calculated)
8.119
GRAVY (calculated)
-0.419
Length
313 amino acids
Sequence
(BLAST)
001: MPADDMPQPG FVKNESDLAI MVATALAFSI FIVGLASVCY RWAGRRFYAD EQSVNLSTHP QHELQTARRG TTRRGIDAAI VESFQTFLYS EVKEQRIGKG
101: GVECVVCLCE FQDNDRLSLM PNCCHVYHAD CVSVWLSDHS TCPLCRVDLV FQQGQGSDPD PELGVVDTTE ARLSESMTWT NRSRPPRSRS MRLPHLRVAD
201: MSLSRSHSTG HRVAEPVENL DRFTLRLPDG VRTRLIKKTL VRSSQGLYRS RSVGSRSARS VFSEQWCNYK NHRRIHSMTL SFTDHLRVWL AGDVVAPPNS
301: EQTSREFRPD DLV
Best Arabidopsis Sequence Match ( AT2G34990.2 )
(BLAST)
001: MVSFERNIRV LLQSVAYESS ETMVQPGTEI KASDLTLLVI TIILFAIFIV GLASVCFRWT SRQFYSQESI NPFTDSDVES RTSITAVRGL DEAIINSFPT
101: FLYSEVKERR IGIGGVECAV CICEFEDHET LRLMPECCHV FHADCVSVWL SDHSTCPLCR VDLCLQPGER SYLNPEPDLV ESTNSHLFDG VTWTNRNRPS
201: RSWSTRLSQC RVSQILISRS HSTGHSVVQP LDNLDRFTLR LPEEVRRQLT KKTVDNVAFS QARSSRRGYR SRSAGSERSV FSYQRRMHSF SDCAWSTSCG
301: GEAVAPSKDS RRISVEQSQL DDRV
Arabidopsis Description
RING/U-box superfamily protein [Source:TAIR;Acc:AT2G34990]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.