Factsheet for GSMUA_Achr6P30500_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P17910_001	Banana	golgi, plasma membrane, vacuole	60.96	51.59
GSMUA_Achr8P09280_001	Banana	cytosol	8.22	50.0
GSMUA_Achr3P20400_001	Banana	mitochondrion	46.58	39.53
GSMUA_Achr10P...	Banana	plasma membrane	52.05	39.18
GSMUA_Achr7P12810_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	40.41	38.69
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	45.55	37.68
AT4G09100.1	Thale cress	extracellular	16.78	37.12
GSMUA_Achr9P15010_001	Banana	endoplasmic reticulum, plasma membrane	40.41	32.96
GSMUA_Achr3P06680_001	Banana	mitochondrion, plastid	42.81	32.22
CDX80653	Canola	plasma membrane	32.19	31.02
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	35.27	30.65
CDX86163	Canola	plasma membrane	31.16	30.33
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.51	30.26
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	31.51	30.26
CDY53236	Canola	plasma membrane	35.96	30.26
GSMUA_AchrUn_...	Banana	plastid	36.64	29.72
CDX75097	Canola	extracellular	14.04	29.71
CDX82175	Canola	extracellular	23.63	29.49
Bra009962.1-P	Field mustard	mitochondrion, plastid	28.77	29.37
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	33.9	29.12
Bra038386.1-P	Field mustard	extracellular	13.7	28.99
CDY48058	Canola	extracellular	13.7	28.99
KRH33975	Soybean	golgi, plasma membrane, vacuole	35.27	28.69
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	35.62	28.26
Bra040642.1-P	Field mustard	plasma membrane	36.99	27.98
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	33.22	27.71
CDY18787	Canola	plasma membrane	36.64	27.65
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	31.51	27.54
Bra036631.1-P	Field mustard	plasma membrane	32.88	27.43
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	37.33	27.39
KRH68588	Soybean	plasma membrane	34.25	27.32
Bra010641.1-P	Field mustard	extracellular, golgi	28.77	27.27
CDX90377	Canola	extracellular, golgi	28.77	27.27
CDX99986	Canola	plasma membrane	32.53	27.22
AT3G05200.1	Thale cress	plasma membrane	36.99	27.14
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	36.99	27.14
CDY39477	Canola	extracellular	28.77	27.1
CDY25038	Canola	plasma membrane	33.9	26.76
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	34.59	26.72
CDY05577	Canola	plasma membrane	34.59	26.44
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	34.93	26.42
KRG96857	Soybean	vacuole	33.9	26.4
Bra020591.1-P	Field mustard	plasma membrane	34.25	26.25
CDX84270	Canola	cytosol, plastid, vacuole	28.08	26.2
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plasma membrane	15.07	26.19
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	35.62	26.13
CDY31657	Canola	extracellular, plasma membrane, plastid	32.88	26.09
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	28.77	26.01
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	32.53	25.82
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	32.19	25.54
AT1G35330.1	Thale cress	endoplasmic reticulum	28.42	25.3
KRH72413	Soybean	cytosol, golgi, vacuole	32.19	25.13
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	26.71	24.92
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	26.71	24.92
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	32.19	24.8
CDX82176	Canola	extracellular	30.82	24.66
GSMUA_Achr4P12270_001	Banana	plastid	14.38	24.28
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	34.59	24.05
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	35.62	24.02
CDY70284	Canola	plasma membrane	31.85	23.91
Bra012330.1-P	Field mustard	golgi, plasma membrane	28.08	23.84
CDY12022	Canola	plasma membrane	28.77	23.8
AT4G09120.1	Thale cress	plasma membrane	28.08	23.77
AT2G34990.2	Thale cress	plasma membrane	26.37	23.77
CDY05049	Canola	plasma membrane	23.63	23.63
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	27.4	23.6
Bra028075.1-P	Field mustard	plasma membrane	28.42	23.51
Bra008016.1-P	Field mustard	plasma membrane	32.19	23.33
CDY03651	Canola	plasma membrane	32.19	23.33
AT1G72200.1	Thale cress	plasma membrane	32.19	23.27
CDY03116	Canola	plasma membrane	28.08	23.23
CDX90713	Canola	extracellular, golgi, plasma membrane	26.71	23.01
Bra040855.1-P	Field mustard	golgi, plasma membrane	29.45	22.87
CDY21367	Canola	golgi, plasma membrane	29.45	22.87
CDX82179	Canola	plasma membrane	27.4	22.79
Bra008015.1-P	Field mustard	plasma membrane	30.82	22.73
CDY03652	Canola	plasma membrane	30.82	22.73
CDY62007	Canola	golgi, plasma membrane	29.11	22.61
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	23.29	22.52
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	27.4	22.28
KRH72412	Soybean	nucleus, plasma membrane, plastid	29.11	22.02
Solyc12g087860.1.1	Tomato	vacuole	28.08	21.98
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	29.45	21.88
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	26.71	21.85
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	29.11	21.74
PGSC0003DMT400045807	Potato	plasma membrane	27.74	21.43
KRH16794	Soybean	plasma membrane	28.42	21.17
AT1G22500.1	Thale cress	plasma membrane	27.4	21.0
GSMUA_Achr6P22700_001	Banana	plasma membrane	16.78	20.59
GSMUA_Achr1P17360_001	Banana	nucleus, plasma membrane, plastid	17.47	20.24
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	23.97	20.11
CDY05145	Canola	plasma membrane	20.21	19.87
CDY70750	Canola	extracellular, mitochondrion, nucleus	20.55	19.8
CDY27787	Canola	extracellular, plasma membrane, vacuole	20.21	19.6
GSMUA_Achr9P13810_001	Banana	golgi, mitochondrion, plastid, vacuole	21.58	17.12
GSMUA_Achr3P05190_001	Banana	endoplasmic reticulum, golgi, plastid	21.92	16.67
GSMUA_Achr9P06250_001	Banana	endoplasmic reticulum, plasma membrane	20.89	16.62
GSMUA_Achr9P00230_001	Banana	vacuole	20.89	16.58
GSMUA_Achr4P08120_001	Banana	plasma membrane	19.52	15.88
GSMUA_Achr6P26720_001	Banana	plasma membrane	18.15	15.1
CDY12527	Canola	extracellular, plasma membrane, vacuole	10.96	13.45
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.96	13.45
CDY50446	Canola	mitochondrion	10.27	12.55

Protein Annotations

EnsemblPlants:GSMUA_Achr6P30500_001	EnsemblPlants:GSMUA_Achr6T30500_001	EnsemblPlantsGene:GSMUA_Achr6G30500_001	Gene3D:3.30.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155
PANTHER:PTHR14155:SF414	PFAM:PF13639	PFscan:PS50089	SEG:seg	SignalP:SignalP-noTM	SMART:SM00184
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI000295E80A	UniProt:M0TBJ5	MapMan:19.2.2.1.5.3.3	:

Description

Putative E3 ubiquitin-protein ligase ATL31 [Source:GMGC_GENE;Acc:GSMUA_Achr6G30500_001]

Coordinates

chr6:+:30482036..30483022

Molecular Weight (calculated)

32702.7 Da

IEP (calculated)

9.239

GRAVY (calculated)

-0.483

Length

292 amino acids

Sequence
(BLAST)

001: MATKRHRRPT HGGSNDNHGL HLSLLLLLLI LTPWCAHAQP SPPSDDISND NDNNYGKLNP TVTVVVLASF STFFFLVVFI IYIRRRTAED NFVRSFHHRG
101: PAARSLRQQQ RRRRVSPQLI ETFPTLTHAK VKGLEVGKGA LECAVCLSEF DDDDELRLLP RCSHLFHTDC IDVWLASHVT CPVCRANLAE PATADGEKDE
201: VALIGRSRRE ARQQSGSRPA KFSRSYSTGH SVFRSLEDVD RCTLRVPDQE LNEIFAARKL DRSASCVAFP TSGEESSRRG PGTRRSSSGR SR

Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)

001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV

Arabidopsis Description

ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.