Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- endoplasmic reticulum 3
- extracellular 3
- vacuole 2
- plasma membrane 2
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05049 | Canola | plasma membrane | 62.58 | 64.73 |
| AT4G09120.1 | Thale cress | plasma membrane | 71.19 | 62.32 |
| Bra000673.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 64.24 | 57.23 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 63.91 | 56.93 |
| AT4G09130.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 66.23 | 56.02 |
| AT1G35330.1 | Thale cress | endoplasmic reticulum | 41.72 | 38.41 |
| AT4G09100.1 | Thale cress | extracellular | 15.89 | 36.36 |
| AT2G35000.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 38.41 | 30.69 |
| AT2G34990.2 | Thale cress | plasma membrane | 32.78 | 30.56 |
| AT4G40070.1 | Thale cress | extracellular, golgi, mitochondrion, plastid | 26.49 | 24.77 |
| AT5G27420.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 29.8 | 24.46 |
| AT1G22500.1 | Thale cress | plasma membrane | 30.46 | 24.15 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 16.89 | 24.06 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 27.15 | 23.77 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 22.52 | 23.29 |
| AT1G72200.1 | Thale cress | plasma membrane | 31.13 | 23.27 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 26.49 | 23.26 |
| AT3G05200.1 | Thale cress | plasma membrane | 30.46 | 23.12 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 29.47 | 22.94 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 26.49 | 22.35 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 28.48 | 22.22 |
| Zm00001d005936_P001 | Maize | plasma membrane | 28.81 | 22.14 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 25.83 | 22.1 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 22.19 | 21.97 |
| GSMUA_AchrUn_... | Banana | plastid | 25.83 | 21.67 |
| Zm00001d020789_P001 | Maize | plasma membrane | 28.48 | 21.61 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 27.81 | 21.43 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 27.15 | 21.35 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 26.82 | 20.98 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 27.48 | 20.91 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 28.48 | 20.87 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 27.15 | 20.71 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 16.23 | 20.68 |
| GSMUA_Achr10P... | Banana | plasma membrane | 26.49 | 20.62 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 27.15 | 20.3 |
| Os03t0188200-01 | Rice | golgi | 23.51 | 20.11 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 26.82 | 20.05 |
| TraesCS6D01G113000.1 | Wheat | golgi | 26.49 | 19.95 |
| Zm00001d031261_P001 | Maize | golgi | 24.83 | 19.89 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 26.49 | 19.7 |
| Os08t0484200-01 | Rice | golgi | 26.82 | 19.61 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 23.18 | 19.61 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 22.85 | 19.44 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 22.85 | 19.44 |
| AT2G27940.1 | Thale cress | plasma membrane | 15.23 | 19.41 |
| EES18560 | Sorghum | golgi, plasma membrane | 25.17 | 19.34 |
| AT2G35420.1 | Thale cress | plasma membrane, plastid | 16.23 | 19.29 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 22.52 | 19.15 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 24.5 | 19.12 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 19.87 | 19.05 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 22.52 | 18.78 |
| EER92732 | Sorghum | golgi | 22.52 | 18.48 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 24.83 | 18.47 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.5 | 18.41 |
| AT4G17920.1 | Thale cress | plasma membrane | 17.55 | 18.34 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.5 | 18.27 |
| TraesCS7D01G178000.1 | Wheat | golgi | 24.5 | 18.14 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 24.83 | 18.07 |
| AT5G46650.1 | Thale cress | plasma membrane | 17.22 | 17.99 |
| Zm00001d048230_P001 | Maize | golgi | 22.52 | 17.89 |
| TraesCS7B01G081700.1 | Wheat | golgi | 24.5 | 17.87 |
| TraesCS7A01G176700.1 | Wheat | golgi | 24.5 | 17.83 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 22.85 | 17.83 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 23.84 | 17.78 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 24.83 | 17.73 |
| HORVU4Hr1G057610.1 | Barley | plastid | 24.17 | 17.72 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 24.5 | 17.58 |
| Zm00001d018122_P001 | Maize | vacuole | 24.17 | 17.42 |
| TraesCS4D01G200100.1 | Wheat | plastid | 23.84 | 17.39 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 24.83 | 17.24 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 24.83 | 17.16 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 24.83 | 16.97 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 21.19 | 16.71 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 22.85 | 16.59 |
| TraesCS4B01G199100.1 | Wheat | plastid | 23.51 | 15.88 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 18.87 | 14.62 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 25.5 | 14.13 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 17.88 | 12.5 |
| AT5G05810.1 | Thale cress | endoplasmic reticulum, golgi | 16.56 | 12.29 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EntrezGene:826489 | UniProt:A0A178V1A5 | EMBL:AC005359 | ProteinID:AEE82723.1 |
| ArrayExpress:AT4G09110 | EnsemblPlantsGene:AT4G09110 | RefSeq:AT4G09110 | TAIR:AT4G09110 | RefSeq:AT4G09110-TAIR-G | EnsemblPlants:AT4G09110.1 |
| TAIR:AT4G09110.1 | ProteinID:CAB78035.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043161 | GO:GO:0046872 |
| GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_192650.1 | ProteinID:OAO99470.1 | PFAM:PF13639 |
| PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF208 | UniProt:Q9M0R6 | SMART:SM00184 | SUPFAM:SSF57850 |
| TMHMM:TMhelix | UniParc:UPI00000A237E | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
ATL35Putative RING-H2 finger protein ATL35 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R6]
Coordinates
chr4:+:5812335..5813642
Molecular Weight (calculated)
34318.5 Da
IEP (calculated)
7.449
GRAVY (calculated)
-0.154
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIFARDLIY RIETKVLLPL FLVHLLPYVT CQQESESVDR NRKTNFPTET VIAIIVLAIF ISLSMVACFL HKTFYRAEVE AASQEVFHSR ARRGLEKELV
101: ESFPIFLYSE VKGLKIGKGG VECAICLSEF VDKETLRWMP PCSHTFHANC IDVWLSSQST CPACRANLSL KPGESYPYPI TDLETGNEQR DEHSLLQLGT
201: NLDRFTLQLP EEMQRQLVSL NLIRTSNMTL PRAMSSRQGY RSGFSHGRQT LRRAISMSLS FSLQAASVRS TVGRDDLVLE TSQAKDKDLC EQSFQHLMPE
301: KV
101: ESFPIFLYSE VKGLKIGKGG VECAICLSEF VDKETLRWMP PCSHTFHANC IDVWLSSQST CPACRANLSL KPGESYPYPI TDLETGNEQR DEHSLLQLGT
201: NLDRFTLQLP EEMQRQLVSL NLIRTSNMTL PRAMSSRQGY RSGFSHGRQT LRRAISMSLS FSLQAASVRS TVGRDDLVLE TSQAKDKDLC EQSFQHLMPE
301: KV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.