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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 6
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48058 Canola extracellular 72.73 69.57
CDX75097 Canola extracellular 72.73 69.57
Bra038386.1-P Field mustard extracellular 72.73 69.57
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 38.64 24.06
AT2G27940.1 Thale cress plasma membrane 31.82 17.72
GSMUA_Achr6P30500_001 Banana plasma membrane 37.12 16.78
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 37.88 16.39
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 36.36 15.89
AT2G34990.2 Thale cress plasma membrane 38.64 15.74
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 44.7 15.61
GSMUA_AchrUn_... Banana plastid 41.67 15.28
AT1G35330.1 Thale cress endoplasmic reticulum 37.88 15.24
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 42.42 15.22
AT5G46650.1 Thale cress plasma membrane 32.58 14.88
AT4G17920.1 Thale cress plasma membrane 32.58 14.88
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 36.36 14.86
AT4G09120.1 Thale cress plasma membrane 38.64 14.78
AT2G35420.1 Thale cress plasma membrane, plastid 28.03 14.57
GSMUA_Achr3P20400_001 Banana mitochondrion 37.88 14.53
GSMUA_AchrUn_... Banana golgi, plasma membrane 38.64 14.45
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 37.12 14.2
Zm00001d027983_P001 Maize plasma membrane, plastid 38.64 14.09
AT3G05200.1 Thale cress plasma membrane 42.42 14.07
AT1G22500.1 Thale cress plasma membrane 40.15 13.91
AT1G72200.1 Thale cress plasma membrane 42.42 13.86
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 37.12 13.73
TraesCS4A01G104900.1 Wheat mitochondrion 40.15 13.7
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 37.12 13.69
Os03t0188200-01 Rice golgi 36.36 13.6
EER92732 Sorghum golgi 37.88 13.59
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 41.67 13.55
HORVU4Hr1G078260.1 Barley plasma membrane 36.36 13.45
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 39.39 13.4
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 40.91 13.37
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 40.91 13.37
Zm00001d005936_P001 Maize plasma membrane 39.39 13.23
EES18560 Sorghum golgi, plasma membrane 39.39 13.23
TraesCS6D01G113000.1 Wheat golgi 40.15 13.22
Zm00001d048230_P001 Maize golgi 37.88 13.16
HORVU4Hr1G057610.1 Barley plastid 40.91 13.11
HORVU4Hr1G080840.1 Barley cytosol 23.48 13.08
TraesCS4D01G200100.1 Wheat plastid 40.91 13.04
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 38.64 13.01
Zm00001d031261_P001 Maize golgi 37.12 13.0
TraesCS4B01G304400.1 Wheat plasma membrane 34.85 12.96
TraesCS4A01G404600.1 Wheat plasma membrane 34.85 12.96
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 37.88 12.92
GSMUA_Achr10P... Banana plasma membrane 37.88 12.89
EER99041 Sorghum endoplasmic reticulum, plasma membrane 40.15 12.86
Os08t0484200-01 Rice golgi 40.15 12.83
Zm00001d029395_P001 Maize plasma membrane, plastid 37.12 12.79
TraesCS3D01G495500.1 Wheat vacuole 37.12 12.69
Os09t0468300-00 Rice golgi, plasma membrane 37.12 12.66
TraesCS5B01G245800.1 Wheat plasma membrane 37.88 12.63
TraesCS5A01G248100.1 Wheat plasma membrane 37.88 12.59
Zm00001d020789_P001 Maize plasma membrane 37.88 12.56
HORVU5Hr1G069980.1 Barley plasma membrane 36.36 12.5
Os03t0391100-00 Rice endoplasmic reticulum, golgi 40.91 12.41
TraesCS4D01G302600.1 Wheat plasma membrane 33.33 12.39
TraesCS7B01G081700.1 Wheat golgi 38.64 12.32
TraesCS7D01G178000.1 Wheat golgi 37.88 12.25
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 38.64 12.11
TraesCS4B01G199100.1 Wheat plastid 40.91 12.08
TraesCS7A01G176700.1 Wheat golgi 37.88 12.05
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 37.88 12.02
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 40.15 11.99
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 36.36 11.85
AT2G20030.1 Thale cress endoplasmic reticulum, plasma membrane 34.09 11.54
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 34.85 11.36
HORVU6Hr1G077610.1 Barley plasma membrane 34.85 11.33
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 35.61 11.33
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 34.09 11.19
OQU85775 Sorghum golgi, plasma membrane, vacuole 35.61 11.11
Zm00001d018122_P001 Maize vacuole 34.85 10.98
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 34.09 10.3
AT5G05810.1 Thale cress endoplasmic reticulum, golgi 31.06 10.07
TraesCS3B01G549900.1 Wheat vacuole 22.73 9.52
AT4G28890.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 31.06 9.49
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 37.12 8.99
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10EntrezGene:826488UniProt:A0A178V0A7EMBL:AC005359ProteinID:AEE82722.1
ArrayExpress:AT4G09100EnsemblPlantsGene:AT4G09100RefSeq:AT4G09100TAIR:AT4G09100RefSeq:AT4G09100-TAIR-GEnsemblPlants:AT4G09100.1
TAIR:AT4G09100.1EMBL:BT024815ProteinID:CAB78034.1EMBL:DQ059117GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005575GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0009056GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016567GO:GO:0016740
GO:GO:0019538GO:GO:0043161GO:GO:0046872GO:GO:0061630InterPro:IPR001841InterPro:IPR011016
InterPro:IPR013083RefSeq:NP_192649.1ProteinID:OAO99077.1PFAM:PF13639PO:PO:0009005PO:PO:0009047
PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF263UniProt:Q9M0R7SMART:SM00184SMART:SM00744
SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI00000AB4BAInterPro:Znf_RINGInterPro:Znf_RING-CHInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
ATL39RING-H2 finger protein ATL39 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R7]
Coordinates
chr4:+:5811115..5811846
Molecular Weight (calculated)
14893.0 Da
IEP (calculated)
7.271
GRAVY (calculated)
0.043
Length
132 amino acids
Sequence
(BLAST)
001: MSYFKRNEGT IVFAFASIGF IAFYIINYYI RRCRNRAAAA GDIEEARMSP RRPPRGLDAE AIKSFPSFVY TEARGIEPGI GELECVVCLN EFKDDETLRL
101: VPPCVHVFHA DCVDIWLSHS STCPICRAKV VP
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.