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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 5
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 92.71 90.82
TraesCS5B01G245800.1 Wheat plasma membrane 93.49 90.66
TraesCS5A01G248100.1 Wheat plasma membrane 92.97 89.92
TraesCS3B01G549900.1 Wheat vacuole 62.24 75.87
Os09t0468300-00 Rice golgi, plasma membrane 73.44 72.87
TraesCS3D01G495500.1 Wheat vacuole 71.09 70.73
Zm00001d020789_P001 Maize plasma membrane 70.57 68.09
Zm00001d005936_P001 Maize plasma membrane 69.53 67.94
EER99041 Sorghum endoplasmic reticulum, plasma membrane 71.35 66.5
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 57.55 54.7
HORVU3Hr1G007990.1 Barley cytosol 11.72 50.56
HORVU6Hr1G051510.1 Barley nucleus 10.16 44.83
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 38.54 44.05
HORVU5Hr1G086510.1 Barley mitochondrion 9.9 43.18
KRH33975 Soybean golgi, plasma membrane, vacuole 40.36 43.18
HORVU4Hr1G080840.1 Barley cytosol 25.52 41.35
HORVU7Hr1G096980.1 Barley extracellular, vacuole 21.35 39.61
Bra010641.1-P Field mustard extracellular, golgi 31.77 39.61
CDX90377 Canola extracellular, golgi 31.77 39.61
CDY53236 Canola plasma membrane 35.42 39.19
KRG96857 Soybean vacuole 38.02 38.93
CDY39477 Canola extracellular 31.25 38.71
KRH68588 Soybean plasma membrane 36.46 38.25
HORVU1Hr1G001970.1 Barley mitochondrion 8.85 37.78
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 40.62 37.14
Bra040642.1-P Field mustard plasma membrane 36.98 36.79
CDY18787 Canola plasma membrane 36.98 36.69
AT4G09100.1 Thale cress extracellular 12.5 36.36
HORVU4Hr1G004070.1 Barley cytosol 22.92 36.21
Bra036631.1-P Field mustard plasma membrane 32.81 36.0
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 32.81 36.0
AT3G05200.1 Thale cress plasma membrane 37.24 35.93
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 29.95 35.6
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 34.11 35.6
KRH72413 Soybean cytosol, golgi, vacuole 34.64 35.56
CDX99986 Canola plasma membrane 32.29 35.53
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 30.73 35.33
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 30.99 35.0
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 34.38 34.83
CDX82175 Canola extracellular 21.09 34.62
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 19.01 34.43
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 34.38 34.2
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 35.42 34.17
HORVU5Hr1G106000.1 Barley golgi 30.47 34.11
CDY25038 Canola plasma membrane 32.81 34.05
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 35.16 33.92
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 35.16 33.92
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 26.82 33.88
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 26.82 33.88
CDY05577 Canola plasma membrane 33.59 33.77
Bra020591.1-P Field mustard plasma membrane 33.07 33.33
HORVU6Hr1G077610.1 Barley plasma membrane 35.16 33.25
Bra009962.1-P Field mustard mitochondrion, plastid 24.74 33.22
CDX80653 Canola plasma membrane 25.78 32.67
HORVU3Hr1G098880.1 Barley plasma membrane 29.17 32.65
CDX86163 Canola plasma membrane 25.26 32.33
PGSC0003DMT400073575 Potato extracellular, plasma membrane 36.2 32.1
HORVU4Hr1G078260.1 Barley plasma membrane 29.69 31.93
CDX75097 Canola extracellular 11.46 31.88
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 30.73 31.22
CDY31657 Canola extracellular, plasma membrane, plastid 29.69 30.98
AT4G09120.1 Thale cress plasma membrane 27.6 30.72
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 29.43 30.71
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 29.43 30.71
AT2G34990.2 Thale cress plasma membrane 25.78 30.56
Bra038386.1-P Field mustard extracellular 10.94 30.43
CDY48058 Canola extracellular 10.94 30.43
KRH72412 Soybean nucleus, plasma membrane, plastid 30.47 30.31
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 30.73 30.18
KRH16794 Soybean plasma membrane 30.73 30.1
CDX84270 Canola cytosol, plastid, vacuole 24.48 30.03
CDY70284 Canola plasma membrane 30.21 29.82
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 27.86 29.8
CDY62007 Canola golgi, plasma membrane 29.17 29.79
Bra005375.1-P Field mustard cytosol, nucleus, plastid 24.22 29.71
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 24.22 29.71
AT1G72200.1 Thale cress plasma membrane 31.25 29.7
AT1G35330.1 Thale cress endoplasmic reticulum 25.26 29.57
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 26.56 29.31
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 29.95 29.26
Bra040855.1-P Field mustard golgi, plasma membrane 28.65 29.26
CDY21367 Canola golgi, plasma membrane 28.65 29.26
HORVU7Hr1G121570.1 Barley endoplasmic reticulum 19.27 29.25
Bra008016.1-P Field mustard plasma membrane 30.21 28.78
CDY03651 Canola plasma membrane 30.21 28.78
Bra012330.1-P Field mustard golgi, plasma membrane 25.78 28.78
CDX82179 Canola plasma membrane 26.3 28.77
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 30.99 28.61
CDX82176 Canola extracellular 27.08 28.49
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 25.0 28.32
HORVU4Hr1G057610.1 Barley plastid 30.21 28.16
CDY05049 Canola plasma membrane 21.35 28.08
AT1G22500.1 Thale cress plasma membrane 27.6 27.82
CDY12022 Canola plasma membrane 25.26 27.48
CDX90713 Canola extracellular, golgi, plasma membrane 24.22 27.43
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 21.35 27.15
CDY05145 Canola plasma membrane 20.83 26.94
Bra028075.1-P Field mustard plasma membrane 24.74 26.91
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 25.0 26.89
Solyc12g087860.1.1 Tomato vacuole 26.04 26.81
PGSC0003DMT400045807 Potato plasma membrane 26.3 26.72
CDY03116 Canola plasma membrane 24.48 26.63
CDY27787 Canola extracellular, plasma membrane, vacuole 20.83 26.58
Bra008015.1-P Field mustard plasma membrane 27.08 26.26
CDY03652 Canola plasma membrane 27.08 26.26
CDY70750 Canola extracellular, mitochondrion, nucleus 19.79 25.08
CDY12527 Canola extracellular, plasma membrane, vacuole 13.02 21.01
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 13.02 21.01
HORVU1Hr1G095220.1 Barley golgi, plasma membrane 19.27 18.78
HORVU7Hr1G098470.1 Barley plastid 18.23 17.5
CDY50446 Canola mitochondrion 9.9 15.9
Protein Annotations
EnsemblPlants:HORVU5Hr1G069980.1EnsemblPlantsGene:HORVU5Hr1G069980Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155PANTHER:PTHR14155:SF322
PFAM:PF13639PFscan:PS50089SEG:segSignalP:SignalP-TMSMART:SM00184SUPFAM:SSF57850
TMHMM:TMhelixUniParc:UPI000B469B02UniProt:A0A287RPA8MapMan:19.2.2.1.5.3.3::
Description
No Description!
Coordinates
chrchr5H:+:526655289..526657023
Molecular Weight (calculated)
40923.3 Da
IEP (calculated)
8.648
GRAVY (calculated)
-0.267
Length
384 amino acids
Sequence
(BLAST)
001: MGPAPGRLWL LFLLALAVAE LGAAQQNPPP PGGQYYTTNF SPSMAIVIVV LIAAFFFLGF FSVYVRHCYG DNTYAATTLP IGAAAARSRR QQRGLDPAVL
101: ETFPTMAYAD VKEHKAVKGA LECAVCISEF DDDDTLRLLP KCSHVFHPDC IDTWLASHVT CPVCRANLVP GDDADAPAAG DAAPAEPSSV HPAPQPQEPA
201: SETEAAHAVV IDVEESEDER IIREETDELT RIGSLKRALR SKSSRGPARF PRSHSTGHSL AARAGTGAER FTLRLPESVL REVVAAGKLR RTQSLVAFTA
301: GRQGSTRRAL RLGGDGSSRR GRSVRLGQSG RWPSFLSRTF SAAWGSRSTR RAESDGSSKG GKPAGAGGKS VECNDQACAA GQRV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.