Factsheet for HORVU3Hr1G007990.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G086510.1	Barley	mitochondrion	53.93	54.55
HORVU1Hr1G001970.1	Barley	mitochondrion	53.93	53.33
HORVU6Hr1G051510.1	Barley	nucleus	50.56	51.72
GSMUA_Achr8P09280_001	Banana	cytosol	23.6	43.75
HORVU7Hr1G096980.1	Barley	extracellular, vacuole	64.04	27.54
TraesCS3A01G051000.1	Wheat	vacuole	92.13	24.77
TraesCS3D01G050600.1	Wheat	plasma membrane	94.38	24.07
TraesCS3B01G060000.1	Wheat	mitochondrion	59.55	22.75
HORVU4Hr1G004070.1	Barley	cytosol	61.8	22.63
HORVU7Hr1G121570.1	Barley	endoplasmic reticulum	49.44	17.39
HORVU4Hr1G080840.1	Barley	cytosol	46.07	17.3
HORVU4Hr1G022090.1	Barley	endoplasmic reticulum, golgi, plasma membrane	40.45	16.98
HORVU5Hr1G106000.1	Barley	golgi	49.44	12.83
KRH13267	Soybean	plasma membrane	22.47	12.27
HORVU3Hr1G098880.1	Barley	plasma membrane	47.19	12.24
HORVU4Hr1G078260.1	Barley	plasma membrane	48.31	12.04
HORVU5Hr1G069980.1	Barley	plasma membrane	50.56	11.72
HORVU6Hr1G077610.1	Barley	plasma membrane	50.56	11.08
HORVU6Hr1G022590.1	Barley	golgi, mitochondrion	49.44	10.89
HORVU7Hr1G036380.2	Barley	endoplasmic reticulum	49.44	10.58
KRH38505	Soybean	plasma membrane, vacuole	32.58	10.18
HORVU4Hr1G057610.1	Barley	plastid	40.45	8.74
HORVU1Hr1G095220.1	Barley	golgi, plasma membrane	38.2	8.63
HORVU7Hr1G098470.1	Barley	plastid	34.83	7.75

Protein Annotations

EnsemblPlants:HORVU3Hr1G007990.1	EnsemblPlantsGene:HORVU3Hr1G007990	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155	PANTHER:PTHR14155:SF263	PFAM:PF13639	PFscan:PS50089	SEG:seg
SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI000B46BA26	UniProt:A0A287K227	MapMan:19.2.2.1.5.3.3	:

Description

No Description!

Coordinates

chrchr3H:-:18723272..18723538

Molecular Weight (calculated)

9721.2 Da

IEP (calculated)

3.977

GRAVY (calculated)

-0.584

Length

89 amino acids

Sequence
(BLAST)

1: LECAVCLTEF EDADDLRLLP HCSHAFHPDC IDPWLETRTT CPLCRADLEK PPPPAAAPAP SSPPDAVVAM PVQDEPKEGS DEDDRKEEA

Best Arabidopsis Sequence Match ( AT1G72200.1 )
(BLAST)

001: MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV

Arabidopsis Description

ATL11RING-H2 finger protein ATL11 [Source:UniProtKB/Swiss-Prot;Acc:Q84W40]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.