Factsheet for HORVU4Hr1G004070.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G096980.1	Barley	extracellular, vacuole	69.96	82.13
HORVU1Hr1G001970.1	Barley	mitochondrion	27.98	75.56
HORVU5Hr1G086510.1	Barley	mitochondrion	25.93	71.59
HORVU3Hr1G007990.1	Barley	cytosol	22.63	61.8
HORVU6Hr1G051510.1	Barley	nucleus	19.34	54.02
Os04t0450300-00	Rice	endoplasmic reticulum, golgi	72.02	51.62
Zm00001d003499_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	69.14	43.3
KXG26428	Sorghum	plasma membrane	71.6	42.86
HORVU4Hr1G080840.1	Barley	cytosol	25.93	26.58
HORVU7Hr1G121570.1	Barley	endoplasmic reticulum	25.51	24.51
GSMUA_Achr8P09280_001	Banana	cytosol	4.53	22.92
HORVU5Hr1G069980.1	Barley	plasma membrane	36.21	22.92
HORVU3Hr1G098880.1	Barley	plasma membrane	29.22	20.7
HORVU5Hr1G106000.1	Barley	golgi	28.81	20.41
HORVU6Hr1G077610.1	Barley	plasma membrane	32.51	19.46
KRH38505	Soybean	plasma membrane, vacuole	22.22	18.95
HORVU6Hr1G022590.1	Barley	golgi, mitochondrion	31.28	18.81
HORVU4Hr1G078260.1	Barley	plasma membrane	24.28	16.53
HORVU7Hr1G036380.2	Barley	endoplasmic reticulum	22.22	12.98
HORVU4Hr1G057610.1	Barley	plastid	21.81	12.86
HORVU4Hr1G022090.1	Barley	endoplasmic reticulum, golgi, plasma membrane	9.88	11.32
KRH13267	Soybean	plasma membrane	7.0	10.43
HORVU1Hr1G095220.1	Barley	golgi, plasma membrane	16.46	10.15
HORVU7Hr1G098470.1	Barley	plastid	16.46	10.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G004070.1	EnsemblPlantsGene:HORVU4Hr1G004070	Gene3D:3.30.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0008270
InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_H2	PANTHER:PTHR14155
PANTHER:PTHR14155:SF434	PFAM:PF12678	PFscan:PS50089	SEG:seg	SUPFAM:SSF57850	UniParc:UPI000B46331E
UniProt:A0A287MZ78	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:9415930..9416931

Molecular Weight (calculated)

26429.0 Da

IEP (calculated)

9.124

GRAVY (calculated)

-0.707

Length

243 amino acids

Sequence
(BLAST)

001: AWDCFVLQND LRLLPHCSHA FYPECIDPWL EARITCPLCR ANLEKPPPSP PPVVAPPSPE QVARRQPSPS SSSSHAVAIP VREEEESDED NRKEEAMELE
101: MLPSERRAAM LPRSHSTGHS LFAAPAAAAE RSDHERFTLR LSHHVREQVL RSRRVRHATS LIDLVGASPE GSVRGGRPAG GGGSFGNAGG GRRWQAFLAR
201: TMSWTRGGGN GSVRKGWDGS TRRGRDDPES SKKGAASPAV ARP

Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)

001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV

Arabidopsis Description

ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.