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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G007990.1 Barley cytosol 17.3 46.07
TraesCS7B01G081700.1 Wheat golgi 78.9 45.17
TraesCS7D01G178000.1 Wheat golgi 74.26 43.14
TraesCS7A01G176700.1 Wheat golgi 75.11 42.89
HORVU6Hr1G051510.1 Barley nucleus 14.35 39.08
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 66.24 37.74
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 33.33 37.26
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 61.18 32.81
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 56.12 31.59
HORVU5Hr1G086510.1 Barley mitochondrion 11.39 30.68
HORVU1Hr1G001970.1 Barley mitochondrion 11.39 30.0
HORVU7Hr1G096980.1 Barley extracellular, vacuole 23.63 27.05
HORVU6Hr1G077610.1 Barley plasma membrane 44.73 26.11
HORVU4Hr1G004070.1 Barley cytosol 26.58 25.93
HORVU5Hr1G069980.1 Barley plasma membrane 41.35 25.52
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 56.12 24.4
AT4G09100.1 Thale cress extracellular 13.08 23.48
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 32.07 22.62
KRH33975 Soybean golgi, plasma membrane, vacuole 34.18 22.56
CDY39477 Canola extracellular 28.27 21.61
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 36.29 21.29
Bra010641.1-P Field mustard extracellular, golgi 27.43 21.1
CDX90377 Canola extracellular, golgi 27.43 21.1
HORVU3Hr1G098880.1 Barley plasma membrane 30.38 20.99
HORVU5Hr1G106000.1 Barley golgi 30.38 20.99
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 29.54 20.0
AT1G35330.1 Thale cress endoplasmic reticulum 27.43 19.82
CDX84270 Canola cytosol, plastid, vacuole 26.16 19.81
CDX99986 Canola plasma membrane 29.11 19.77
Bra036631.1-P Field mustard plasma membrane 29.11 19.71
Bra005375.1-P Field mustard cytosol, nucleus, plastid 25.74 19.49
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 25.74 19.49
KRG96857 Soybean vacuole 30.8 19.47
KRH68588 Soybean plasma membrane 29.96 19.4
KRH16794 Soybean plasma membrane 32.07 19.39
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 30.8 19.26
KRH72413 Soybean cytosol, golgi, vacuole 30.38 19.25
Bra009962.1-P Field mustard mitochondrion, plastid 23.21 19.23
CDY53236 Canola plasma membrane 27.85 19.02
AT4G09120.1 Thale cress plasma membrane 27.43 18.84
CDX75097 Canola extracellular 10.97 18.84
AT2G34990.2 Thale cress plasma membrane 25.74 18.83
CDX80653 Canola plasma membrane 24.05 18.81
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 24.05 18.75
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 24.05 18.75
CDY03116 Canola plasma membrane 27.85 18.7
CDY12022 Canola plasma membrane 27.85 18.7
KRH72412 Soybean nucleus, plasma membrane, plastid 30.38 18.65
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 31.22 18.59
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 31.22 18.59
Bra028075.1-P Field mustard plasma membrane 27.43 18.41
CDY18787 Canola plasma membrane 29.96 18.35
CDX86163 Canola plasma membrane 23.21 18.33
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 24.89 18.27
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 25.74 18.26
Bra040642.1-P Field mustard plasma membrane 29.54 18.13
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 25.74 17.94
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 27.85 17.93
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 31.22 17.62
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 29.54 17.59
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 26.58 17.55
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 24.89 17.4
Bra038386.1-P Field mustard extracellular 10.13 17.39
CDY48058 Canola extracellular 10.13 17.39
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 28.69 17.39
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 28.27 17.36
CDY25038 Canola plasma membrane 27.0 17.3
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 27.43 17.2
CDX90713 Canola extracellular, golgi, plasma membrane 24.47 17.11
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 25.74 17.09
Bra012330.1-P Field mustard golgi, plasma membrane 24.47 16.86
PGSC0003DMT400073575 Potato extracellular, plasma membrane 30.8 16.86
AT3G05200.1 Thale cress plasma membrane 28.27 16.83
Bra020591.1-P Field mustard plasma membrane 27.0 16.8
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 27.85 16.79
CDY62007 Canola golgi, plasma membrane 26.58 16.76
CDY05577 Canola plasma membrane 27.0 16.75
HORVU7Hr1G121570.1 Barley endoplasmic reticulum 17.72 16.6
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 25.74 16.58
HORVU4Hr1G078260.1 Barley plasma membrane 24.89 16.53
CDY05049 Canola plasma membrane 20.25 16.44
Solyc12g087860.1.1 Tomato vacuole 25.74 16.35
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 25.32 16.3
CDY31657 Canola extracellular, plasma membrane, plastid 25.32 16.3
CDX82175 Canola extracellular 16.03 16.24
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 20.68 16.23
Bra040855.1-P Field mustard golgi, plasma membrane 25.74 16.22
CDY21367 Canola golgi, plasma membrane 25.74 16.22
CDX82179 Canola plasma membrane 23.63 15.95
CDY70284 Canola plasma membrane 26.16 15.94
CDX82176 Canola extracellular 24.47 15.89
PGSC0003DMT400045807 Potato plasma membrane 25.32 15.87
AT1G22500.1 Thale cress plasma membrane 25.32 15.75
AT1G72200.1 Thale cress plasma membrane 26.58 15.59
Bra008016.1-P Field mustard plasma membrane 26.16 15.38
CDY03651 Canola plasma membrane 26.16 15.38
CDY70750 Canola extracellular, mitochondrion, nucleus 19.41 15.18
Bra008015.1-P Field mustard plasma membrane 24.05 14.39
CDY03652 Canola plasma membrane 24.05 14.39
HORVU4Hr1G057610.1 Barley plastid 24.89 14.32
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 19.41 13.22
HORVU7Hr1G098470.1 Barley plastid 20.25 12.0
CDY50446 Canola mitochondrion 11.81 11.72
CDY05145 Canola plasma membrane 14.35 11.45
CDY12527 Canola extracellular, plasma membrane, vacuole 10.97 10.92
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 10.97 10.92
HORVU1Hr1G095220.1 Barley golgi, plasma membrane 17.72 10.66
CDY27787 Canola extracellular, plasma membrane, vacuole 13.5 10.63
Protein Annotations
EnsemblPlants:HORVU4Hr1G080840.1EnsemblPlantsGene:HORVU4Hr1G080840Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155PANTHER:PTHR14155:SF281PFAM:PF13639PFscan:PS50089SEG:seg
SUPFAM:SSF57850UniParc:UPI000B46CFE1UniProt:A0A287PU75MapMan:19.2.2.1.5.3.3::
Description
No Description!
Coordinates
chrchr4H:-:617425188..617426424
Molecular Weight (calculated)
26627.1 Da
IEP (calculated)
5.633
GRAVY (calculated)
-0.707
Length
237 amino acids
Sequence
(BLAST)
001: MTYAEARELH EKEAGGKGED STAVLECVVC LSEFEDGDQL RLLPKCSHAF HPDYIGEWLV GHVTCPVCRC SLAPEEPAAT AAAEADGAGG EEQRAPEVSI
101: DMNREGDGEE QEERMREAAE LEWIDSMRRA VRSRSRSGRP FSHAHSTGHS LSARFDGDLE RFTLRLLEHV RRDMVTAGEE SLRHTVARDA GTRSTRIGRS
201: DMRPEPSSRR FFFACPVWME RKSRFSPDRS GPGRFFL
Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)
001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
Arabidopsis Description
ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.