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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 3
  • nucleus 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86163 Canola plasma membrane 91.96 87.67
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 68.53 64.47
Bra036631.1-P Field mustard plasma membrane 61.89 50.57
Bra020591.1-P Field mustard plasma membrane 62.94 47.24
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 53.15 39.38
Bra040642.1-P Field mustard plasma membrane 52.8 39.12
Bra038386.1-P Field mustard extracellular 16.08 33.33
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 38.11 31.32
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 31.47 29.51
GSMUA_Achr6P30500_001 Banana plasma membrane 29.37 28.77
Bra010641.1-P Field mustard extracellular, golgi 30.77 28.57
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 33.57 28.57
KRH33975 Soybean golgi, plasma membrane, vacuole 35.31 28.13
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 33.22 27.54
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 13.64 27.46
KRH68588 Soybean plasma membrane 34.27 26.78
KRG96857 Soybean vacuole 34.97 26.67
GSMUA_AchrUn_... Banana golgi, plasma membrane 32.87 26.63
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 32.52 25.98
Zm00001d005936_P001 Maize plasma membrane 35.31 25.7
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 35.66 25.63
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 35.31 25.38
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 30.07 25.37
Os09t0468300-00 Rice golgi, plasma membrane 34.27 25.32
GSMUA_Achr3P20400_001 Banana mitochondrion 30.42 25.29
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 34.62 25.26
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 37.06 25.24
Zm00001d020789_P001 Maize plasma membrane 34.62 24.87
EER99041 Sorghum endoplasmic reticulum, plasma membrane 35.66 24.76
HORVU5Hr1G069980.1 Barley plasma membrane 33.22 24.74
TraesCS5A01G248100.1 Wheat plasma membrane 34.27 24.69
TraesCS5B01G245800.1 Wheat plasma membrane 33.92 24.49
PGSC0003DMT400073575 Potato extracellular, plasma membrane 37.06 24.48
TraesCS3D01G495500.1 Wheat vacuole 32.87 24.35
Bra005375.1-P Field mustard cytosol, nucleus, plastid 26.57 24.28
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 17.83 24.06
GSMUA_Achr10P... Banana plasma membrane 32.17 23.71
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 29.72 23.68
Bra028075.1-P Field mustard plasma membrane 29.02 23.51
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 31.82 23.45
GSMUA_AchrUn_... Banana plastid 29.37 23.33
Bra008016.1-P Field mustard plasma membrane 32.87 23.33
HORVU4Hr1G080840.1 Barley cytosol 19.23 23.21
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 22.73 23.13
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 29.37 22.83
Bra013268.1-P Field mustard plasma membrane 23.43 22.79
Bra012330.1-P Field mustard golgi, plasma membrane 27.27 22.67
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 32.17 22.66
Bra025008.1-P Field mustard plastid 22.73 22.65
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 31.82 22.52
Os08t0484200-01 Rice golgi 32.52 22.52
Bra008015.1-P Field mustard plasma membrane 31.12 22.47
TraesCS6D01G113000.1 Wheat golgi 31.47 22.44
TraesCS3B01G549900.1 Wheat vacuole 24.48 22.22
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 31.12 22.03
Bra040855.1-P Field mustard golgi, plasma membrane 28.67 21.81
EES18560 Sorghum golgi, plasma membrane 29.37 21.37
HORVU4Hr1G078260.1 Barley plasma membrane 25.87 20.73
TraesCS4B01G304400.1 Wheat plasma membrane 25.52 20.56
Zm00001d031261_P001 Maize golgi 26.92 20.42
Zm00001d018122_P001 Maize vacuole 29.72 20.29
TraesCS4A01G404600.1 Wheat plasma membrane 25.17 20.28
TraesCS4D01G302600.1 Wheat plasma membrane 25.17 20.28
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 29.37 20.24
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 29.37 19.95
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 30.42 19.91
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 30.42 19.68
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.62 19.65
OQU85775 Sorghum golgi, plasma membrane, vacuole 29.02 19.62
Os03t0188200-01 Rice golgi 24.13 19.55
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.62 19.51
TraesCS4A01G104900.1 Wheat mitochondrion 26.22 19.38
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.92 19.01
HORVU6Hr1G077610.1 Barley plasma membrane 26.92 18.97
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 25.17 18.6
TraesCS7B01G081700.1 Wheat golgi 26.92 18.6
TraesCS4D01G200100.1 Wheat plastid 26.92 18.6
EER92732 Sorghum golgi 23.78 18.48
HORVU4Hr1G057610.1 Barley plastid 26.57 18.45
TraesCS7D01G178000.1 Wheat golgi 26.22 18.38
TraesCS7A01G176700.1 Wheat golgi 26.57 18.31
Zm00001d029395_P001 Maize plasma membrane, plastid 24.13 18.02
Zm00001d027983_P001 Maize plasma membrane, plastid 22.38 17.68
Os03t0391100-00 Rice endoplasmic reticulum, golgi 26.57 17.47
Zm00001d048230_P001 Maize golgi 22.73 17.11
TraesCS4B01G199100.1 Wheat plastid 26.22 16.78
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 23.08 15.87
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 29.37 15.41
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 20.98 14.85
Bra005343.1-P Field mustard plastid 14.34 14.7
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 21.33 14.52
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 20.98 14.39
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 20.63 14.05
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 14.69 12.5
Bra012630.1-P Field mustard nucleus 22.38 10.34
Protein Annotations
EnsemblPlants:Bra009962.1EnsemblPlants:Bra009962.1-PEnsemblPlantsGene:Bra009962Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089SEG:segSMART:SM00184SUPFAM:SSF57850
TMHMM:TMhelixUniParc:UPI000253F4B5UniProt:M4D0G4MapMan:19.2.2.1.5.3.3::
Description
AT5G27420 (E=1e-085) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA06:-:18337759..18338711
Molecular Weight (calculated)
32114.6 Da
IEP (calculated)
8.307
GRAVY (calculated)
-0.183
Length
286 amino acids
Sequence
(BLAST)
001: MCSCPVSTII RIRASFKSTR TTQPQASSHN ILVIFCVIAF FLILAFLPDC IRRCNEAVNG SVDPSVGGAR GETNATVARG IDASMIETFP TFIYSEVKTQ
101: KIGNGALECA ICLTEFGDDE TLRFLPKCDH VFHAHCIGAW LQGHVTCPVC RTNLAYSQQQ MAEPVEPEVI TETDIESQQP VISEPVVESV ARVKLVRSHT
201: TGHSVILPGE CTERFTLRLP YDLRKKIRAN WKMNRSNSLS VLPRSTGKPV DRSLDRWDQW LFIKSPQFMW RRRDDGSIRR GRGDSI
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.