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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48058 Canola extracellular 100.0 100.0
AT4G09100.1 Thale cress extracellular 69.57 72.73
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 23.91 23.24
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 28.99 18.87
Bra009962.1-P Field mustard mitochondrion, plastid 33.33 16.08
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 31.88 14.47
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 31.16 14.1
Bra013268.1-P Field mustard plasma membrane 29.71 13.95
Bra025008.1-P Field mustard plastid 28.99 13.94
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 36.23 13.93
Bra005375.1-P Field mustard cytosol, nucleus, plastid 31.16 13.74
GSMUA_Achr6P30500_001 Banana plasma membrane 28.99 13.7
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 36.23 13.59
GSMUA_Achr3P20400_001 Banana mitochondrion 33.33 13.37
GSMUA_AchrUn_... Banana plastid 34.78 13.33
GSMUA_AchrUn_... Banana golgi, plasma membrane 34.06 13.31
Bra010641.1-P Field mustard extracellular, golgi 29.71 13.31
Bra040642.1-P Field mustard plasma membrane 36.96 13.21
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 36.23 12.95
Bra036631.1-P Field mustard plasma membrane 31.88 12.57
Bra012330.1-P Field mustard golgi, plasma membrane 31.16 12.5
Bra040855.1-P Field mustard golgi, plasma membrane 34.06 12.5
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 31.16 12.46
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 25.36 12.46
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 30.43 12.39
EER92732 Sorghum golgi 32.61 12.23
Bra005343.1-P Field mustard plastid 24.64 12.19
Zm00001d027983_P001 Maize plasma membrane, plastid 31.88 12.15
TraesCS4A01G104900.1 Wheat mitochondrion 34.06 12.14
HORVU4Hr1G078260.1 Barley plasma membrane 31.16 12.04
TraesCS6D01G113000.1 Wheat golgi 34.78 11.97
Zm00001d005936_P001 Maize plasma membrane 34.06 11.96
Bra008016.1-P Field mustard plasma membrane 34.78 11.91
Os03t0188200-01 Rice golgi 30.43 11.9
Zm00001d048230_P001 Maize golgi 32.61 11.84
TraesCS4A01G404600.1 Wheat plasma membrane 30.43 11.83
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 34.78 11.82
Bra020591.1-P Field mustard plasma membrane 32.61 11.81
Zm00001d029395_P001 Maize plasma membrane, plastid 32.61 11.75
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 34.06 11.63
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 34.06 11.63
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 32.61 11.63
Bra028075.1-P Field mustard plasma membrane 29.71 11.61
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 32.61 11.6
TraesCS4B01G304400.1 Wheat plasma membrane 29.71 11.55
TraesCS4D01G302600.1 Wheat plasma membrane 29.71 11.55
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 29.71 11.45
EES18560 Sorghum golgi, plasma membrane 32.61 11.45
HORVU4Hr1G057610.1 Barley plastid 34.06 11.41
EER99041 Sorghum endoplasmic reticulum, plasma membrane 34.06 11.41
TraesCS3D01G495500.1 Wheat vacuole 31.88 11.4
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 31.88 11.22
Zm00001d031261_P001 Maize golgi 30.43 11.14
TraesCS4D01G200100.1 Wheat plastid 33.33 11.11
Os09t0468300-00 Rice golgi, plasma membrane 31.16 11.11
Zm00001d020789_P001 Maize plasma membrane 31.88 11.06
Os03t0391100-00 Rice endoplasmic reticulum, golgi 34.78 11.03
HORVU5Hr1G069980.1 Barley plasma membrane 30.43 10.94
Os08t0484200-01 Rice golgi 32.61 10.9
TraesCS5B01G245800.1 Wheat plasma membrane 31.16 10.86
Bra008015.1-P Field mustard plasma membrane 31.16 10.86
TraesCS5A01G248100.1 Wheat plasma membrane 31.16 10.83
GSMUA_Achr10P... Banana plasma membrane 30.43 10.82
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 32.61 10.69
TraesCS7B01G081700.1 Wheat golgi 31.16 10.39
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 31.16 10.36
TraesCS7D01G178000.1 Wheat golgi 30.43 10.29
TraesCS4B01G199100.1 Wheat plastid 33.33 10.29
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 32.61 10.18
HORVU4Hr1G080840.1 Barley cytosol 17.39 10.13
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 29.71 10.12
TraesCS7A01G176700.1 Wheat golgi 30.43 10.12
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 30.43 10.1
Zm00001d018122_P001 Maize vacuole 30.43 10.02
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 28.99 9.95
OQU85775 Sorghum golgi, plasma membrane, vacuole 30.43 9.93
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 28.99 9.88
HORVU6Hr1G077610.1 Barley plasma membrane 28.99 9.85
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 23.91 9.82
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 28.26 9.65
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 30.43 9.61
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 28.99 9.59
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 28.99 9.52
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 27.54 9.05
TraesCS3B01G549900.1 Wheat vacuole 19.57 8.57
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 31.88 8.07
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 18.12 7.18
Bra012630.1-P Field mustard nucleus 30.43 6.79
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10EnsemblPlantsGene:Bra038386EnsemblPlants:Bra038386.1EnsemblPlants:Bra038386.1-PGO:GO:0003674
GO:GO:0005488GO:GO:0005575GO:GO:0008270GO:GO:0016020GO:GO:0016021GO:GO:0046872
InterPro:IPR001841InterPro:IPR011016InterPro:IPR013083UniProt:M4FBC0PFAM:PF13639PFscan:PS50089
PANTHER:PTHR14155PANTHER:PTHR14155:SF263SMART:SM00184SMART:SM00744SUPFAM:SSF57850TMHMM:TMhelix
UniParc:UPI00025423A0InterPro:Znf_RINGInterPro:Znf_RING-CHInterPro:Znf_RING/FYVE/PHD::
Description
AT4G09100 (E=3e-052) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA09:+:11051774..11052190
Molecular Weight (calculated)
15532.8 Da
IEP (calculated)
6.482
GRAVY (calculated)
0.209
Length
138 amino acids
Sequence
(BLAST)
001: MSYFRRNEGT IVFALASLAF IAFYCINYCF RRCRNRDVAL AAGDTEEAVF SPIRPPRGLD AKGVQSIPSF IYTEANGIGP GHGELVCAVC LNEYKEDEML
101: RLILPCGHVF HVHCVDIWFS YRSTCPICRA DVIVDPVY
Best Arabidopsis Sequence Match ( AT4G09100.1 )
(BLAST)
001: MSYFKRNEGT IVFAFASIGF IAFYIINYYI RRCRNRAAAA GDIEEARMSP RRPPRGLDAE AIKSFPSFVY TEARGIEPGI GELECVVCLN EFKDDETLRL
101: VPPCVHVFHA DCVDIWLSHS STCPICRAKV VP
Arabidopsis Description
ATL39RING-H2 finger protein ATL39 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.