Factsheet for TraesCS3D01G495500.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G549900.1	Wheat	vacuole	72.28	88.57
TraesCS5D01G254900.1	Wheat	golgi, plasma membrane	72.8	71.68
HORVU5Hr1G069980.1	Barley	plasma membrane	70.73	71.09
Os09t0468300-00	Rice	golgi, plasma membrane	61.66	61.5
Zm00001d005936_P001	Maize	plasma membrane	60.88	59.8
Zm00001d020789_P001	Maize	plasma membrane	56.99	55.28
EER99041	Sorghum	endoplasmic reticulum, plasma membrane	58.81	55.1
TraesCS6D01G113000.1	Wheat	golgi	50.26	48.38
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	34.72	39.88
KRH33975	Soybean	golgi, plasma membrane, vacuole	36.01	38.72
Bra010641.1-P	Field mustard	extracellular, golgi	29.79	37.34
CDX90377	Canola	extracellular, golgi	29.79	37.34
AT4G09100.1	Thale cress	extracellular	12.69	37.12
TraesCS2D01G315800.1	Wheat	golgi	35.49	36.73
KRG96857	Soybean	vacuole	35.49	36.53
CDY39477	Canola	extracellular	29.27	36.45
KRH68588	Soybean	plasma membrane	34.46	36.34
CDY53236	Canola	plasma membrane	30.57	34.01
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	36.79	33.81
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	28.24	33.75
TraesCS3D01G050600.1	Wheat	plasma membrane	30.31	33.52
CDX75097	Canola	extracellular	11.92	33.33
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	28.5	32.93
Bra009962.1-P	Field mustard	mitochondrion, plastid	24.35	32.87
CDX80653	Canola	plasma membrane	25.65	32.67
CDX86163	Canola	plasma membrane	25.39	32.67
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	28.76	32.65
KRH72413	Soybean	cytosol, golgi, vacuole	31.61	32.62
Bra036631.1-P	Field mustard	plasma membrane	29.53	32.57
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	29.53	32.57
CDX82175	Canola	extracellular	19.69	32.48
Bra040642.1-P	Field mustard	plasma membrane	32.38	32.38
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.39	32.24
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.39	32.24
CDX99986	Canola	plasma membrane	29.02	32.09
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	30.57	32.07
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	32.9	31.91
Bra038386.1-P	Field mustard	extracellular	11.4	31.88
CDY48058	Canola	extracellular	11.4	31.88
CDY18787	Canola	plasma membrane	31.87	31.78
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	31.09	31.66
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	32.64	31.66
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	32.38	31.41
AT3G05200.1	Thale cress	plasma membrane	32.12	31.16
TraesCS7D01G178000.1	Wheat	golgi	32.9	31.13
TraesCS5D01G446700.1	Wheat	golgi	27.2	31.07
TraesCS6D01G294800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	32.38	30.86
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.57	30.57
KRH72412	Soybean	nucleus, plasma membrane, plastid	30.31	30.31
CDY25038	Canola	plasma membrane	29.02	30.27
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	33.68	30.02
CDY05577	Canola	plasma membrane	29.27	29.58
TraesCS7D01G537300.1	Wheat	golgi, nucleus, plasma membrane	16.32	29.58
TraesCS3D01G452500.1	Wheat	golgi, plasma membrane, vacuole	26.42	29.48
Bra020591.1-P	Field mustard	plasma membrane	29.02	29.4
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	28.76	29.37
KRH16794	Soybean	plasma membrane	29.79	29.34
AT1G35330.1	Thale cress	endoplasmic reticulum	24.87	29.27
CDY31657	Canola	extracellular, plasma membrane, plastid	27.72	29.08
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	27.46	28.8
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	27.46	28.8
TraesCS4D01G302600.1	Wheat	plasma membrane	26.42	28.73
AT4G09120.1	Thale cress	plasma membrane	25.65	28.7
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	29.02	28.64
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	26.17	28.13
AT2G34990.2	Thale cress	plasma membrane	23.58	28.09
TraesCS2D01G501500.1	Wheat	plastid	14.25	27.92
CDX84270	Canola	cytosol, plastid, vacuole	22.54	27.8
CDY70284	Canola	plasma membrane	27.98	27.76
TraesCS7D01G538000.1	Wheat	golgi	18.39	27.73
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	22.28	27.48
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	22.28	27.48
Solyc12g087860.1.1	Tomato	vacuole	26.42	27.35
AT1G72200.1	Thale cress	plasma membrane	28.5	27.23
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	27.72	27.23
CDY12022	Canola	plasma membrane	24.87	27.2
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	23.83	27.14
Bra040855.1-P	Field mustard	golgi, plasma membrane	26.42	27.13
CDY21367	Canola	golgi, plasma membrane	26.42	27.13
CDY62007	Canola	golgi, plasma membrane	26.42	27.13
CDX82179	Canola	plasma membrane	24.61	27.07
CDY05049	Canola	plasma membrane	20.47	27.05
PGSC0003DMT400045807	Potato	plasma membrane	26.42	26.98
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	20.98	26.82
Bra028075.1-P	Field mustard	plasma membrane	24.35	26.63
Bra008016.1-P	Field mustard	plasma membrane	27.72	26.55
CDY03651	Canola	plasma membrane	27.72	26.55
CDY03116	Canola	plasma membrane	24.09	26.35
CDX90713	Canola	extracellular, golgi, plasma membrane	23.06	26.25
Bra012330.1-P	Field mustard	golgi, plasma membrane	23.32	26.16
CDX82176	Canola	extracellular	24.61	26.03
AT1G22500.1	Thale cress	plasma membrane	25.39	25.72
TraesCS4D01G200100.1	Wheat	plastid	27.2	25.36
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	23.32	25.21
Bra008015.1-P	Field mustard	plasma membrane	25.39	24.75
CDY03652	Canola	plasma membrane	25.39	24.75
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	21.76	24.14
CDY70750	Canola	extracellular, mitochondrion, nucleus	18.39	23.43
CDY27787	Canola	extracellular, plasma membrane, vacuole	16.84	21.59
CDY05145	Canola	plasma membrane	16.58	21.55
CDY12527	Canola	extracellular, plasma membrane, vacuole	11.4	18.49
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.14	18.07
TraesCS7D01G420000.1	Wheat	plastid	17.36	16.71
TraesCS1D01G453000.1	Wheat	extracellular, plasma membrane	18.65	16.59
CDY50446	Canola	mitochondrion	9.59	15.48

Protein Annotations

EnsemblPlants:TraesCS3D01G495500.1	EnsemblPlantsGene:TraesCS3D01G495500	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155	PANTHER:PTHR14155:SF322	PFAM:PF13639	PFscan:PS50089	SEG:seg
SignalP:SignalP-TM	SMART:SM00184	SUPFAM:SSF57850	TIGR:cd16454	TMHMM:TMhelix	MapMan:19.2.2.1.5.3.3

Description

No Description!

Coordinates

chr3D:+:587608218..587609378

Molecular Weight (calculated)

41412.3 Da

IEP (calculated)

8.613

GRAVY (calculated)

-0.164

Length

386 amino acids

Sequence
(BLAST)

001: MGPAPCTNGL LIVLLLVLAV ADFGSGQQNP PPPGAYYTAK FSPSRATVII VLIVILVAFL FLFFLCLFLV CIHNCHGDTS YSATRLPIGA PAARPRRQQR
101: GLDPAVLETF PTMAYADVKE HKAVKGALEC AVCLSEFDDD ETLRLLPKCS HVFHPDCIDT WLASHITCPV CRANLVPDDT DFPGTGGELS SVHPASRPPQ
201: EVPPSASATE AAPTVVIDAE ESEDERIIRE DTDELARIGS LKRALRSKSS RAPTHFSRSH STGHSLAARA SSCTGTGAGV ERFTLRLPEP EHAGRLRRMK
301: SLAVFTAGRQ GSTYRSLRLC GDGSSRSGTR VRLGQSGRWP SFLSRTFSAA WGARSTQSAE LDGSSKGGKP AASQWSAKTT RPGVRC

Best Arabidopsis Sequence Match ( AT1G35330.1 )
(BLAST)

001: MMTIGKSPIL LHHHVIFLLL LVLQVSGQHQ PRTTAPPYIA QRPNQVPAVI IAMLMFTLLF SMLACCVCYK YTNTSPHGTS SDTEEGGHGE VAFTRRTSRG
101: LGKDVINSFP SFLYSQVKGL KIGKGGVECA ICLNEFEDEE TLRLMPPCSH AFHASCIDVW LSSRSTCPVC RASLPPKPGS DQNSLYPFIR PHDNQDMDLE
201: NVTARRSVLE SPDVRLLDRL SWSNNTGANT PPRSRSTGLS NWRITELLFP RSHSTGHSLV PRVENLDRFT LQLPEEVRRQ LSHMKTLPQA RSSREGYRSG
301: SVGSERRGKG KEKEFGEGSF DRLKAEMV

Arabidopsis Description

RING/U-box superfamily protein [Source:TAIR;Acc:AT1G35330]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.